RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 NR1D2Q14995 579 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PDK2Q15119 407 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 DPYSL2Q16555 572 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 AMZ1Q400G9 498 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 ARMC12Q5T9G4 340 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 AFMIDQ63HM1 303 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 USP45Q70EL2 814 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 H2AFVQ71UI9 128 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 DPPA4Q7L190 304 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 ZNF438Q7Z4V0 828 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 POLNQ7Z5Q5 900 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 TAF8Q7Z7C8 310 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 NRROSQ86YC3 692 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 ARHGAP12Q8IWW6 846 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 NIPA2Q8N8Q9 360 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 FAM46DQ8NEK8 389 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 OR56A4Q8NGH8 313 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 PATE1Q8WXA2 126 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 TMEM159Q96B96 161 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 NUS1Q96E22 293 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 RSRC1Q96IZ7 334 aaKnown RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 CCDC74BQ96LY2 380 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 NSMCE3Q96MG7 304 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 CSPG4P5Q96PW8 444 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 NUDCD1Q96RS6 583 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PAIP2Q9BPZ3 127 aaKnown RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 RHOXF2Q9BQY4 288 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 LGR4Q9BXB1 951 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 MAK16Q9BXY0 300 aaKnown RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 TRIM7Q9C029 511 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 B3GNT4Q9C0J1 378 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 WDR26Q9H7D7 661 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PCDH18Q9HCL0 1135 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 KCNK4Q9NYG8 393 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 TMEM9Q9P0T7 183 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 UVRAGQ9P2Y5 699 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 ANAPC2Q9UJX6 822 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 DNPEPQ9ULA0 475 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PHTF1Q9UMS5 762 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 TTLL3Q9Y4R7 772 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PCDHB11Q9Y5F2 797 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PCDHGC4Q9Y5F7 938 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PCDHGA3Q9Y5H0 932 aa6.62□□□□□ -1.35
VCP-205ENST00000479300 PRRC2CQ9Y520 2896 aaKnown RBP6.62□□□□□ -1.35
VCP-205ENST00000479300 A0A087X0T9 212 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 LOC101059948A0A1B0GTJ6 334 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 AGPSO00116 658 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 NDUFAB1O14561 156 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 SNPHO15079 494 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 NUDT21O43809 227 aaKnown RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 CPNE6O95741 557 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 CYP1A2P05177 515 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 FGF1P05230 155 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 PYGLP06737 847 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 HOXC4P09017 264 aaPredicted RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 FAM228BP0C875 321 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 PRKAR1AP10644 381 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 MX2P20592 715 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 MPSTP25325 297 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 CASP14P31944 242 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 CCR10P46092 362 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 RGRP47804 291 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 SLC10A7Q0GE19 358 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 RALGDSQ12967 914 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 AGERQ15109 404 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 IFI16Q16666 785 aaKnown RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 ZNF569Q5MCW4 686 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 NKAIN2Q5VXU1 208 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 ALS2CLQ60I27 953 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 HGSNATQ68CP4 663 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 CCDC70Q6NSX1 233 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 TIPARPQ7Z3E1 657 aaKnown RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 APLFQ8IW19 511 aaPredicted RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 UNC5BQ8IZJ1 945 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 SLC35F6Q8N357 371 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 ARFGAP1Q8N6T3 406 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 NPWQ8N729 165 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 BMPERQ8N8U9 685 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 CCNYQ8ND76 341 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 OR8K1Q8NGG5 319 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 C9orf43Q8TAL5 461 aaPredicted RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 ART4Q93070 314 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 MARVELD3Q96A59 401 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 ECHDC3Q96DC8 303 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 ABHD17AQ96GS6 310 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 SLC45A3Q96JT2 553 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 BTBD6Q96KE9 485 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 CCDC42Q96M95 316 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 TAAR9Q96RI9 348 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 POLR1EQ9GZS1 481 aaKnown RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 CDH19Q9H159 772 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 DPEP2Q9H4A9 486 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 SUDS3Q9H7L9 328 aaPredicted RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 SLC40A1Q9NP59 571 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 NT5MQ9NPB1 228 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 OCIAD1Q9NX40 245 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms