RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 IL1R1P14778 569 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 TGFBR2P37173 567 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 CSRP3P50461 194 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 MLLT6P55198 1093 aaPredicted RBP21.09■□□□□ 0.97
SDF4-206ENST00000478938 SYT6Q5T7P8 510 aaPredicted RBP21.09■□□□□ 0.97
SDF4-206ENST00000478938 LARP4Q71RC2 724 aaKnown RBP eCLIP21.09■□□□□ 0.972e-17■■■□□ 18.2
SDF4-206ENST00000478938 MICU2Q8IYU8 434 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 PPP1R13LQ8WUF5 828 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 METTL2AQ96IZ6 378 aaKnown RBP21.09■□□□□ 0.97
SDF4-206ENST00000478938 GPR78Q96P69 363 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 NUP50Q9UKX7 468 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 TBC1D24Q9ULP9 559 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 PTGDR2Q9Y5Y4 395 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 A8MUA0 341 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 G3V2T6 193 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 TFECO14948 347 aaPredicted RBP21.09■□□□□ 0.97
SDF4-206ENST00000478938 PGLSO95336 258 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 DNTTP04053 509 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 MTHFRP42898 656 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 ASPAP45381 313 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 PSMD5Q16401 504 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 OR6B2Q6IFH4 312 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 DPY19L3Q6ZPD9 716 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 ZDHHC13Q8IUH4 622 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 UBA3Q8TBC4 463 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 AFG1LQ8WV93 481 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 ZNF670Q9BS34 389 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 CHST12Q9NRB3 414 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 NUFIP1Q9UHK0 495 aaKnown RBP21.09■□□□□ 0.97
SDF4-206ENST00000478938 TCEAL9Q9UHQ7 104 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 FBXO10Q9UK96 956 aa21.09■□□□□ 0.97
SDF4-206ENST00000478938 COL14A1Q05707 1796 aaKnown RBP21.09■□□□□ 0.97
SDF4-206ENST00000478938 M0QYV0 167 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 NFIBO00712 420 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 PSKH1P11801 424 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 CD83Q01151 205 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 IL5RAQ01344 420 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 CDK5R2Q13319 367 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 STARD3Q14849 445 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 TKFCQ3LXA3 575 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 PTRH1Q86Y79 214 aaKnown RBP21.08■□□□□ 0.97
SDF4-206ENST00000478938 CEP97Q8IW35 865 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 UCK2Q9BZX2 261 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 STAP1Q9ULZ2 295 aa21.08■□□□□ 0.97
SDF4-206ENST00000478938 LOC100130705A0A1B0GUX0 176 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 ANGPTL1O95841 491 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 TNFSF9P41273 254 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 CDH8P55286 799 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 LAPTM5Q13571 262 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 CDC42EP5Q6NZY7 148 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 ZC3HC1Q86WB0 502 aaKnown RBP21.08■□□□□ 0.96
SDF4-206ENST00000478938 SH3KBP1Q96B97 665 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 ANKEF1Q9NU02 776 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 IPPQ9Y573 584 aa21.08■□□□□ 0.96
SDF4-206ENST00000478938 TEX51A0A1B0GUA7 166 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 HMX3A6NHT5 357 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 PLK4O00444 970 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 PPEF1O14829 653 aaPredicted RBP21.07■□□□□ 0.96
SDF4-206ENST00000478938 MICAL2O94851 1124 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 BCAT1P54687 386 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 PRKCDQ05655 676 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 SYCE2Q6PIF2 218 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 FAM183BPQ6ZVS7 135 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 RAB43Q86YS6 212 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 SDHCQ99643 169 aaPredicted RBP21.07■□□□□ 0.96
SDF4-206ENST00000478938 POLR3FQ9H1D9 316 aaPredicted RBP21.07■□□□□ 0.96
SDF4-206ENST00000478938 TNKS2Q9H2K2 1166 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 EIF2B3Q9NR50 452 aaKnown RBP21.07■□□□□ 0.96
SDF4-206ENST00000478938 NDFIP2Q9NV92 336 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 ERVK13-1Q9NX77 482 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 GGA3Q9NZ52 723 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 COL20A1Q9P218 1284 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 ACOT9Q9Y305 439 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 MEIOCA2RUB1 952 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 PDPK1O15530 556 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 SLITRK5O94991 958 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 LCKP06239 509 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 JAG1P78504 1218 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 NFYCQ13952 458 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 SYT16Q17RD7 645 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 ZNF470Q6ECI4 717 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 EID3Q8N140 333 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 VANGL2Q9ULK5 521 aa21.07■□□□□ 0.96
SDF4-206ENST00000478938 FAM92AA1XBS5 289 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 H3BMM5 538 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 AGRPO00253 132 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 DSCR3O14972 297 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 MED7O43513 233 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 MED26O95402 600 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 MYL3P08590 195 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 OR4D2P58180 307 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 SNRPD2P62316 118 aaKnown RBP21.06■□□□□ 0.96
SDF4-206ENST00000478938 RAD51Q06609 339 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 CERCAMQ5T4B2 595 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 ZNF691Q5VV52 312 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 LAIR1Q6GTX8 287 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 B3GNT8Q7Z7M8 397 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 TMEM135Q86UB9 458 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 FRS2Q8WU20 508 aa21.06■□□□□ 0.96
SDF4-206ENST00000478938 CDCA5Q96FF9 252 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms