RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SGO1Q5FBB7 561 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 RAB41Q5JT25 222 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 C6orf141Q5SZD1 244 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 FNBP1LQ5T0N5 605 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 GKAP1Q5VSY0 366 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZNF772Q68DY9 489 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 PLEKHA7Q6IQ23 1121 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 LINGO2Q7L985 606 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 PATL1Q86TB9 770 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 NOXA1Q86UR1 476 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SFTPA2Q8IWL1 248 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZCCHC9Q8N567 271 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 BEST2Q8NFU1 509 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 GABPB2Q8TAK5 448 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLC35F5Q8WV83 523 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 CALML4Q96GE6 196 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLC41A2Q96JW4 573 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMEM68Q96MH6 324 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 PRAM1Q96QH2 718 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 FAM110AQ9BQ89 295 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 MSTO1Q9BUK6 570 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 FTOQ9C0B1 505 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 NPFFR1Q9GZQ6 430 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 LHPPQ9H008 270 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 TKTL2Q9H0I9 626 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SMARCAD1Q9H4L7 1026 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 BPIFA1Q9NP55 256 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 SUCLA2Q9P2R7 463 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 NUP188Q5SRE5 1749 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 PEAK1Q9H792 1746 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 CLSPNQ9HAW4 1339 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 TONSLQ96HA7 1378 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 NFAT5O94916 1531 aa4.11□□□□□ -1.75
CDC42BPA-212ENST00000478573 NHSQ6T4R5 1651 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 CHL1O00533 1208 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 PLOD3O60568 738 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 ATP2C2O75185 946 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLC25A12O75746 678 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 STARD3NLO95772 234 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 MMP2P08253 660 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 NR2F1P10589 423 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 TFPIP10646 304 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 KRT10P13645 584 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 AKR1B1P15121 316 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 ARSBP15848 533 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZNF182P17025 639 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 GABRB1P18505 474 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 GNLYP22749 145 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 MCM3P25205 808 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 HOXD3P31249 432 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 PPP3CCP48454 512 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 STK4Q13043 487 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 CAPSQ13938 189 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 ASTE1Q2TB18 679 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 PCGF3Q3KNV8 242 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 DCAF6Q58WW2 860 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 CFAP58Q5T655 872 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 LCTLQ6UWM7 567 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 QSOX2Q6ZRP7 698 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 KRT74Q7RTS7 529 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 WDR63Q8IWG1 891 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLC35F3Q8IY50 421 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 RNF168Q8IYW5 571 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 PARP16Q8N5Y8 322 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 ENGASEQ8NFI3 743 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 HUS1BQ8NHY5 278 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 WFIKKN2Q8TEU8 576 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 MAK16Q9BXY0 300 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 POLDIP3Q9BY77 421 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 RANGRFQ9HD47 186 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 DDX4Q9NQI0 724 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 STK26Q9P289 416 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 CNOT8Q9UFF9 292 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 PCDHGB4Q9UN71 923 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 NFE2L3Q9Y4A8 694 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 CENPJQ9HC77 1338 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 ROCK2O75116 1388 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 USP6P35125 1406 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 PPIP5K1Q6PFW1 1433 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 LRP5O75197 1615 aa4.1□□□□□ -1.75
CDC42BPA-212ENST00000478573 PKD1L3Q7Z443 1732 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 A0A087WYN8 130 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 A0A1W2PQ09 198 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 LDB3O75112 727 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 MTA2O94776 668 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 NKX2-2O95096 273 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 NDUFB4O95168 129 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 LCATP04180 440 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 RB1P06400 928 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 IL11P20809 199 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 RFX5P48382 616 aaPredicted RBP4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 PDLIM4P50479 330 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMPRSS3P57727 454 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 SELENOVP59797 346 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 ADORA2A-AS1P86434 159 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 ZBED6P86452 979 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 Q0VFX4 171 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 ST3GAL1Q11201 340 aa4.09□□□□□ -1.75
CDC42BPA-212ENST00000478573 BECN1Q14457 450 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms