RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SLC23A2Q9UGH3 650 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ZNHIT2Q9UHR6 403 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 KCNK6Q9Y257 313 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 DRG1Q9Y295 367 aaKnown RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ZNF106Q9H2Y7 1883 aaKnown RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 NTN3O00634 580 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 TLX3O43711 291 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 EPOP01588 193 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 MPOP05164 745 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 CHRNA6Q15825 494 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 C14orf28Q4W4Y0 310 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 CERCAMQ5T4B2 595 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 CRTC3Q6UUV7 619 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 FAM151BQ6UXP7 276 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 CHST15Q7LFX5 561 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 GLT6D1Q7Z4J2 308 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 C17orf82Q86X59 251 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 PDCD7Q8N8D1 485 aaKnown RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 SCG3Q8WXD2 468 aaKnown RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 FSD1LQ9BXM9 530 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ENTPD2Q9Y5L3 495 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ITPR1Q14643 2758 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 PKD1L2Q7Z442 2459 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 ANKRD11Q6UB99 2663 aaPredicted RBP17.46■□□□□ 0.39
PTPN7-209ENST00000477554 LOC400499M0QZD8 3231 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 C5orf60A6NFR6 353 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 SLU7O95391 586 aaKnown RBP17.46■□□□□ 0.39
PTPN7-209ENST00000477554 RPLP0P05388 317 aaKnown RBP17.46■□□□□ 0.39
PTPN7-209ENST00000477554 ACP5P13686 325 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 HMGCLP35914 325 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 COILP38432 576 aaPredicted RBP17.46■□□□□ 0.39
PTPN7-209ENST00000477554 GEMP55040 296 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 DCDC1P59894 354 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 TUBB4BP68371 445 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 C2orf54Q08AI8 447 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 ILF3Q12906 894 aaKnown RBP eCLIP17.46■□□□□ 0.39
PTPN7-209ENST00000477554 SNX1Q13596 522 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 OASLQ15646 514 aaKnown RBP17.46■□□□□ 0.39
PTPN7-209ENST00000477554 ISXQ2M1V0 245 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 KCTD11Q693B1 232 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 CCDC137Q6PK04 289 aaKnown RBP17.46■□□□□ 0.39
PTPN7-209ENST00000477554 GALNT13Q8IUC8 556 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 ZNF547Q8IVP9 402 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 ARL14Q8N4G2 192 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 TRAM1L1Q8N609 369 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 GRK7Q8WTQ7 553 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 GLYATL1Q969I3 302 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 GSDMCQ9BYG8 508 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 LRIT1Q9P2V4 623 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 TBC1D29Q9UFV1 150 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 ZNF148Q9UQR1 794 aa17.46■□□□□ 0.39
PTPN7-209ENST00000477554 UNC13CQ8NB66 2214 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 RGSL1A5PLK6 1076 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 PPM1DO15297 605 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 B4GAT1O43505 415 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 BRINP1O60477 761 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 SLC25A14O95258 325 aaPredicted RBP17.45■□□□□ 0.38
PTPN7-209ENST00000477554 CDK4P11802 303 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 TPH1P17752 444 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 HLA-DPA1P20036 260 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 RPIAP49247 311 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 OR1D5P58170 312 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 ITPRIPL1Q6GPH6 555 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 CCDC70Q6NSX1 233 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 KLHL7Q8IXQ5 586 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 KLHDC8BQ8IXV7 354 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 RAVER1Q8IY67 606 aaKnown RBP17.45■□□□□ 0.38
PTPN7-209ENST00000477554 OR13C4Q8NGS5 318 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 GLMNQ92990 594 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 TBL1YQ9BQ87 522 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 DDX47Q9H0S4 455 aaKnown RBP17.45■□□□□ 0.38
PTPN7-209ENST00000477554 NFKBIL1Q9UBC1 381 aaPredicted RBP17.45■□□□□ 0.38
PTPN7-209ENST00000477554 PCYOX1Q9UHG3 505 aa17.45■□□□□ 0.38
PTPN7-209ENST00000477554 NUAK1O60285 661 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 ZSCAN5DPP0CG00 497 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 PRSS56P0CW18 603 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 STIP1P31948 543 aaKnown RBP17.44■□□□□ 0.38
PTPN7-209ENST00000477554 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 B4GALNT1Q00973 533 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 DHX34Q14147 1143 aaKnown RBP17.44■□□□□ 0.38
PTPN7-209ENST00000477554 NKAIN2Q5VXU1 208 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 MAATS1Q7Z4T9 603 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 SPRED1Q7Z699 444 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 CCNJLQ8IV13 435 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 MMGT1Q8N4V1 131 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 OR4K2Q8NGD2 314 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 NAT6Q93015 286 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 CRELD1Q96HD1 420 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 KRT12Q99456 494 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 ZSCAN5AQ9BUG6 496 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 CDH19Q9H159 772 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 RDH14Q9HBH5 336 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 PRDM8Q9NQV8 689 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 NCKIPSDQ9NZQ3 722 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 SCHIP1Q9P0W5 487 aaPredicted RBP17.44■□□□□ 0.38
PTPN7-209ENST00000477554 VPS18Q9P253 973 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 FKBPLQ9UIM3 349 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 AK5Q9Y6K8 562 aa17.44■□□□□ 0.38
PTPN7-209ENST00000477554 PRAMEF33A0A0G2JMD5 474 aa17.43■□□□□ 0.38
PTPN7-209ENST00000477554 TMEM8BA6NDV4 472 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms