RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 UBR7Q8N806 425 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 FAM47BQ8NA70 645 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 SHCBP1Q8NEM2 672 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 RHOXF1Q8NHV9 184 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 BRSK1Q8TDC3 778 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 SDR42E1Q8WUS8 393 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 JPH3Q8WXH2 748 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-212ENST00000477520 KLHL6Q8WZ60 621 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 NKD1Q969G9 470 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 SLC35C1Q96A29 364 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 PDXPQ96GD0 296 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 AGAP4Q96P64 663 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 OPALINQ96PE5 141 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 FAM111AQ96PZ2 611 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 CPXM1Q96SM3 734 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 SORT1Q99523 831 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 PKP2Q99959 881 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 C17orf62Q9BQA9 187 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 TMEM121Q9BTD3 319 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 CHID1Q9BWS9 393 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 CALN1Q9BXU9 219 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 DEFB129Q9H1M3 183 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 MMP27Q9H306 513 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 SYNDIG1Q9H7V2 258 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 COPS7BQ9H9Q2 264 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-212ENST00000477520 LIN28AQ9H9Z2 209 aaKnown RBP4.7□□□□□ -1.66
PTCD3-212ENST00000477520 MRM3Q9HC36 420 aaKnown RBP4.7□□□□□ -1.66
PTCD3-212ENST00000477520 RPRD1BQ9NQG5 326 aaKnown RBP4.7□□□□□ -1.66
PTCD3-212ENST00000477520 SLC17A7Q9P2U7 560 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 MTRRQ9UBK8 725 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 DCDC2Q9UHG0 476 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 SERPINB13Q9UIV8 391 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 CPSF3Q9UKF6 684 aaKnown RBP4.7□□□□□ -1.66
PTCD3-212ENST00000477520 AGO2Q9UKV8 859 aaKnown RBP4.7□□□□□ -1.66
PTCD3-212ENST00000477520 MKLN1Q9UL63 735 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 TMCC3Q9ULS5 477 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 CDC14AQ9UNH5 594 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 COG5Q9UP83 839 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 PCDHGB1Q9Y5G3 927 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 PCDHA2Q9Y5H9 948 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 RAD54BQ9Y620 910 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 KCNE2Q9Y6J6 123 aa4.7□□□□□ -1.66
PTCD3-212ENST00000477520 FOCADQ5VW36 1801 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ATRNL1Q5VV63 1379 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CDK5RAP2Q96SN8 1893 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 A0A0B4J269 797 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 LINC00854A0A1B0GVQ3 168 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 A0A1W2PQ72 361 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TCRBV3S1A0A5B6 114 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 DENND3A2RUS2 1198 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 EFCAB10A6NFE3 127 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 HMX3A6NHT5 357 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 AQP12BA6NM10 295 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF487B1APH4 448 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PATE3B3GLJ2 98 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 LOC110117498-PIK3R3F6TDL0 507 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 H0Y626 953 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 UBE2Q2LH0YL09 131 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 H3BMM5 538 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 J3QRK9 145 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 M0R3G1 203 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CCRL2O00421 344 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PLK4O00444 970 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ACOT8O14734 319 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 STX7O15400 261 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CLDN3O15551 220 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PRKAB2O43741 272 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 LIASO43766 372 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CCNT1O60563 726 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 KPNA6O60684 536 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 GLRA3O75311 464 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 AVILO75366 819 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SUPT7LO94864 414 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 NADKO95544 446 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PAHP00439 452 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SLC4A1P02730 911 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 NR3C1P04150 777 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 DLATP10515 647 aaKnown RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 UMPSP11172 480 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF182P17025 639 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF28P17035 718 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 DNAJB1P25685 340 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 GABRB3P28472 473 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 MAPK4P31152 587 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 HTR7P34969 479 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CAPGP40121 348 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SLC26A3P40879 764 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 HADHAP40939 763 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 OPRL1P41146 370 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 TECP42680 631 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 FMO5P49326 533 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SELENOPP49908 381 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 CACNB3P54284 484 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 MFAP3P55082 362 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 AP1S2P56377 157 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 PEX3P56589 373 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 SSTP61278 116 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 FKBP1BP68106 108 aa4.69□□□□□ -1.66
PTCD3-212ENST00000477520 OTUD4Q01804 1114 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms