RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
VARS2-209ENST00000477288 SLC43A3Q8NBI5 491 aa18.47■□□□□ 0.55
VARS2-209ENST00000477288 ARNTL2Q8WYA1 636 aa18.47■□□□□ 0.55
VARS2-209ENST00000477288 TSHRP16473 764 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 SPAM1P38567 509 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 SLC7A2P52569 658 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 PDX1P52945 283 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 KCTD19Q17RG1 926 aaPredicted RBP18.46■□□□□ 0.55
VARS2-209ENST00000477288 ATP13A5Q4VNC0 1218 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 GK5Q6ZS86 529 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 APOLD1Q96LR9 279 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 TBC1D10AQ9BXI6 508 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 DNAJC11Q9NVH1 559 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 ENTPD5O75356 428 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 GABRB2P47870 512 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 PPIGQ13427 754 aaKnown RBP eCLIP18.46■□□□□ 0.556e-8■■■□□ 16.5
VARS2-209ENST00000477288 TEAD4Q15561 434 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 CHST15Q7LFX5 561 aaPredicted RBP18.46■□□□□ 0.55
VARS2-209ENST00000477288 TTC29Q8NA56 475 aaPredicted RBP18.46■□□□□ 0.55
VARS2-209ENST00000477288 JOSD2Q8TAC2 188 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 PCDH18Q9HCL0 1135 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 PADI3Q9ULW8 664 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 MAP4K5Q9Y4K4 846 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 PRNPP04156 253 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 MSX2P35548 267 aaPredicted RBP18.46■□□□□ 0.55
VARS2-209ENST00000477288 CBX3Q13185 183 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 RNF43Q68DV7 783 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 CMC1Q7Z7K0 106 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 FAM84AQ96KN4 292 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 TPK1Q9H3S4 243 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 PNPLA3Q9NST1 481 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 E9PAM4 449 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 CMPK1P30085 196 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 SLC5A3P53794 718 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 ZACNQ401N2 412 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 TCF25Q9BQ70 676 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 ACSS2Q9NR19 701 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 PLIN3O60664 434 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 SERPINA6P08185 405 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 TACR2P21452 398 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 SNAPC1Q16533 368 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 SLC30A6Q6NXT4 461 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 TMPRSS11AQ6ZMR5 421 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 CFAP206Q8IYR0 622 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 S100ZQ8WXG8 99 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 HERVK_113Q902F9 699 aa18.46■□□□□ 0.55
VARS2-209ENST00000477288 EXOSC8Q96B26 276 aaKnown RBP18.46■□□□□ 0.55
VARS2-209ENST00000477288 RSL24D1Q9UHA3 163 aaKnown RBP18.46■□□□□ 0.55
VARS2-209ENST00000477288 OR2AG2A6NM03 316 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 SNX3O60493 162 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 HCN1O60741 890 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 GMFBP60983 142 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 RNASEH2BQ5TBB1 312 aaKnown RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 CUZD1Q86UP6 607 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 TCAIMQ8N3R3 496 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 MFHAS1Q9Y4C4 1052 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 TREHO43280 583 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 NRP2O60462 931 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 UNC5CO95185 931 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 ITGB5P18084 799 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 XKR4Q5GH76 650 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 CCDC54Q8NEL0 328 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 SHC3Q92529 594 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 UPF1Q92900 1129 aaKnown RBP eCLIP18.45■□□□□ 0.54
VARS2-209ENST00000477288 GAL3ST4Q96RP7 486 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 ZFP37Q9Y6Q3 630 aaPredicted RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 A0A0J9YYE9 177 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 FPGTO14772 594 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 AP2A2O94973 939 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 NR1H2P55055 460 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 FOXM1Q08050 763 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 HECTD2Q5U5R9 776 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 VSTM1Q6UX27 236 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 FRRS1Q6ZNA5 592 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 PACS2Q86VP3 889 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 FUKQ8N0W3 1084 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 OR2T12Q8NG77 320 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 ART4Q93070 314 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 FAM129BQ96TA1 746 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 GPR20Q99678 358 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 PDP1Q9P0J1 537 aaPredicted RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 TRAF6Q9Y4K3 522 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 SMIM28A0A1B0GU29 152 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 GNALP38405 381 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 C2orf80Q0P641 193 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 RALGPS2Q86X27 583 aaPredicted RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 GPR65Q8IYL9 337 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 EIF1ADQ8N9N8 165 aaKnown RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 ERVW-1Q9UQF0 538 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 WBP11Q9Y2W2 641 aaKnown RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 CPSF4LA6NMK7 179 aaKnown RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 CLDN4O14493 209 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 CHP2O43745 196 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 NADKO95544 446 aaPredicted RBP18.45■□□□□ 0.54
VARS2-209ENST00000477288 GALNT7Q86SF2 657 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 CEP295NLQ96MC4 621 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 OSBPL11Q9BXB4 747 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 LRRC19Q9H756 370 aa18.45■□□□□ 0.54
VARS2-209ENST00000477288 PLEKHA1Q9HB21 404 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms