RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 MTX2O75431 263 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 SRP72O76094 671 aaKnown RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 PRAMEF1O95521 474 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 ACP5P13686 325 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 SLC2A4P14672 509 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 ETS1P14921 441 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 TPH1P17752 444 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 PSMA3P25788 255 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 RPL22P35268 128 aaKnown RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 GPR3P46089 330 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 LMAN1P49257 510 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 ZNF140P52738 457 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 XIAPP98170 497 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 CDH17Q12864 832 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 NFATC2Q13469 925 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 LAMB3Q13751 1172 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 GTF2H3Q13889 308 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 SPIDRQ14159 915 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 PTPRCAPQ14761 206 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 RTP5Q14D33 572 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 ISXQ2M1V0 245 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 KHDC1Q4VXA5 237 aaKnown RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 IYDQ6PHW0 289 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 RBM44Q6ZP01 1051 aaKnown RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 ZNF438Q7Z4V0 828 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 LRRTM4Q86VH4 590 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 SFTPA2Q8IWL1 248 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 ASPMQ8IZT6 3477 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 SLC35F6Q8N357 371 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 TAB3Q8N5C8 712 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 PRELID2Q8N945 189 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 DNAAF3Q8N9W5 541 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 CCDC86Q9H6F5 360 aaKnown RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 RABGEF1Q9UJ41 708 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 DNMT3AQ9Y6K1 912 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-205ENST00000477174 DMXL2Q8TDJ6 3036 aa13.26□□□□□ -0.29
ACTN4-205ENST00000477174 OR5K4A6NMS3 321 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 TMX2-CTNND1H3BSU7 103 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 CSO75390 466 aaKnown RBP13.25□□□□□ -0.29
ACTN4-205ENST00000477174 APRTP07741 180 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 ZSCAN5DPP0CG00 497 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 ZNF7P17097 686 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-205ENST00000477174 FASLGP48023 281 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 KCNJ1P48048 391 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 CCL7P80098 99 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 BIRC2Q13490 618 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 POU6F1Q14863 301 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 NR1D2Q14995 579 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 CLPPQ16740 277 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-205ENST00000477174 SKIDA1Q1XH10 827 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 GPR33Q49SQ1 333 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 GPRC6AQ5T6X5 926 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 SNX20Q7Z614 316 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 CCNJLQ8IV13 435 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 ZNF547Q8IVP9 402 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 SFRP1Q8N474 314 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 GLIS1Q8NBF1 620 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 AVL9Q8NBF6 648 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 OR52K1Q8NGK4 314 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 OR13C4Q8NGS5 318 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 ACTRT1Q8TDG2 376 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 STYXQ8WUJ0 223 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 ULK4Q96C45 1275 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 NXPE2Q96DL1 559 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 ZNF514Q96K75 400 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-205ENST00000477174 GFM1Q96RP9 751 aaKnown RBP13.25□□□□□ -0.29
ACTN4-205ENST00000477174 OSBPL9Q96SU4 736 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 TIMM29Q9BSF4 260 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 LRRN3Q9H3W5 708 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 ASB8Q9H765 288 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 EIF2B3Q9NR50 452 aaKnown RBP13.25□□□□□ -0.29
ACTN4-205ENST00000477174 KLC4Q9NSK0 619 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 NLE1Q9NVX2 485 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-205ENST00000477174 TBC1D29Q9UFV1 150 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 FKBPLQ9UIM3 349 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 KCNK6Q9Y257 313 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 IGF2RP11717 2491 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 PTPRBP23467 1997 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 LRP4O75096 1905 aa13.25□□□□□ -0.29
ACTN4-205ENST00000477174 RP1P56715 2156 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 KIR2DS5A0A0G2JLQ3 304 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 A0A0G2JNG1 304 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 KLHL33A6NCF5 533 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 A6NCN8 305 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 H7C0S8 307 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 KIR2DS3K7RE56 304 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 AP3B1O00203 1094 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 PGRMC1O00264 195 aaKnown RBP13.24□□□□□ -0.29
ACTN4-205ENST00000477174 B4GAT1O43505 415 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 RPLP0P05388 317 aaKnown RBP13.24□□□□□ -0.29
ACTN4-205ENST00000477174 F3P13726 295 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 VCLP18206 1134 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 MAZP56270 477 aaKnown RBP13.24□□□□□ -0.29
ACTN4-205ENST00000477174 CDK16Q00536 496 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 B4GALNT1Q00973 533 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 CYP4F3Q08477 520 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 KIR2DS5Q14953 304 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 ST3GAL2Q16842 350 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 CRTC3Q6UUV7 619 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms