RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	PARP6	Q2NL67	630 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	AMZ1	Q400G9	498 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	PHF19	Q5T6S3	580 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	RAB11FIP2	Q7L804	512 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	TRIM48	Q8IWZ4	208 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	NAGS	Q8N159	534 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	MAIP1	Q8WWC4	291 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	KCNE4	Q8WWG9	221 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	OXNAD1	Q96HP4	312 aa	Predicted RBP	10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	HES6	Q96HZ4	224 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	ZNF514	Q96K75	400 aa	Predicted RBP	10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	WDR24	Q96S15	920 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	C19orf43	Q9BQ61	176 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	TBL1Y	Q9BQ87	522 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	TIMM29	Q9BSF4	260 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	DPH1	Q9BZG8	443 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	OSGEPL1	Q9H4B0	414 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	LRRC40	Q9H9A6	602 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	BPIFA1	Q9NP55	256 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	SARS2	Q9NP81	518 aa	Known RBP	10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	KCNK4	Q9NYG8	393 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	ATXN10	Q9UBB4	475 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	CNOT6	Q9ULM6	557 aa	Known RBP	10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	ADGRG1	Q9Y653	693 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	OAS3	Q9Y6K5	1087 aa	Known RBP	10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	DMXL2	Q8TDJ6	3036 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594	WDFY3	Q8IZQ1	3526 aa		10.1	□□□□□ -0.79
CCM2-208	ENST00000476594		A0A1W2PQM1	296 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	PDZK1P1	A8MUH7	402 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	CFAP99	D6REC4	459 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	HGS	O14964	777 aa	Predicted RBP	10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	CHUK	O15111	745 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	SNX2	O60749	519 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	TNFSF15	O95150	251 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	FUCA1	P04066	466 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	F3	P13726	295 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	ZNF8	P17098	575 aa	Predicted RBP	10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	IDS	P22304	550 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	AKT1	P31749	480 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	HAL	P42357	657 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	EPHA4	P54764	986 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	B4GALNT1	Q00973	533 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	LAMB3	Q13751	1172 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	RPS6KA1	Q15418	735 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	LONRF2	Q1L5Z9	754 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	NYAP1	Q6ZVC0	841 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	ADGRG6	Q86SQ4	1221 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	LINC00523	Q86TU6	105 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	TRAPPC5	Q8IUR0	188 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	RBM12B	Q8IXT5	1001 aa	Known RBP	10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	SFRP1	Q8N474	314 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	TRIM58	Q8NG06	486 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	SLC37A2	Q8TED4	501 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	HEXDC	Q8WVB3	486 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	ANP32B	Q92688	251 aa	Known RBP	10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	ULK4	Q96C45	1275 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	SLC46A1	Q96NT5	459 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	KLC4	Q9NSK0	619 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	SMOX	Q9NWM0	555 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	IL17C	Q9P0M4	197 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	TRIM10	Q9UDY6	481 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	RABGEF1	Q9UJ41	708 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	KCNK6	Q9Y257	313 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	LOXL2	Q9Y4K0	774 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	SPO11	Q9Y5K1	396 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	CAPN6	Q9Y6Q1	641 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	BAHCC1	Q9P281	2608 aa		10.09	□□□□□ -0.79
CCM2-208	ENST00000476594	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	ERI2	A8K979	691 aa	Known RBP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594		E7EVH7	732 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	DDX3Y	O15523	660 aa	Known RBP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	TLX3	O43711	291 aa	Predicted RBP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	PRAMEF1	O95521	474 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	AGT	P01019	485 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	VIP	P01282	170 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	ZNF7	P17097	686 aa	Predicted RBP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	MSH3	P20585	1137 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	ITGAL	P20701	1170 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	CD82	P27701	267 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	CSTF2	P33240	577 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	CHRNA4	P43681	627 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	LMAN1	P49257	510 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	OR1D5	P58170	312 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	CCDC173	Q0VFZ6	552 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	TMEM115	Q12893	351 aa	Predicted RBP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	KLF1	Q13351	362 aa	Predicted RBP	10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	COL28A1	Q2UY09	1125 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	ATP13A5	Q4VNC0	1218 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	IYD	Q6PHW0	289 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	C19orf48	Q6RUI8	117 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	CRTC3	Q6UUV7	619 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	FAM151B	Q6UXP7	276 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	RANBP10	Q6VN20	620 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	ZNF662	Q6ZS27	426 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	CLEC14A	Q86T13	490 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	JAML	Q86YT9	394 aa		10.08	□□□□□ -0.8
CCM2-208	ENST00000476594	TTC30B	Q8N4P2	665 aa		10.08	□□□□□ -0.8

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