RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SHMT1P34896 483 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 IL15P40933 162 aaPredicted RBP4.19□□□□□ -1.74
VPS13D-207ENST00000476169 RABIFP47224 123 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TDO2P48775 406 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 CAMLGP49069 296 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 GPR143P51810 404 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 STARD6P59095 220 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 KIAA1024LP59773 190 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 GMFBP60983 142 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 MRPS34P82930 218 aaKnown RBP4.19□□□□□ -1.74
VPS13D-207ENST00000476169 PPP2R2BQ00005 443 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 SHBQ15464 509 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 SMN1Q16637 294 aaKnown RBP4.19□□□□□ -1.74
VPS13D-207ENST00000476169 HFEQ30201 348 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 PLK5Q496M5 336 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 IFI44LQ53G44 452 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 MDH1BQ5I0G3 518 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 KCNT1Q5JUK3 1230 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 HIST2H2BCQ6DN03 193 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 HIST2H2BDQ6DRA6 164 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 SUMO4Q6EEV6 95 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 DPY19L2P1Q6NXN4 242 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 FBXO42Q6P3S6 717 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TEX38Q6PEX7 206 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 KDELC1Q6UW63 502 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TOM1L2Q6ZVM7 507 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 DET1Q7L5Y6 550 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 MIER3Q7Z3K6 550 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 ANKRD13BQ86YJ7 626 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 UXS1Q8NBZ7 420 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 OR10S1Q8NGN2 331 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 SPATA18Q8TC71 538 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 MSI2Q96DH6 328 aaKnown RBP4.19□□□□□ -1.74
VPS13D-207ENST00000476169 BSCL2Q96G97 398 aaPredicted RBP4.19□□□□□ -1.74
VPS13D-207ENST00000476169 FAM111AQ96PZ2 611 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 SH3GL2Q99962 352 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TRIM7Q9C029 511 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 KLK15Q9H2R5 256 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 KCNK15Q9H427 330 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TASP1Q9H6P5 420 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TMEM206Q9H813 350 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TUFT1Q9NNX1 390 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 AATFQ9NY61 560 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TAS2R3Q9NYW6 316 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 IL17BQ9UHF5 180 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 TLK1Q9UKI8 766 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 PACSIN3Q9UKS6 424 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 SNX7Q9UNH6 387 aa4.19□□□□□ -1.74
VPS13D-207ENST00000476169 CYP2D7A0A087X1C5 515 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SLC22A23A1A5C7 686 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 DDTLA6NHG4 134 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 KLRF2D3W0D1 207 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 EBAG9O00559 213 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ZBTB43O43298 467 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 KIF1CO43896 1103 aaKnown RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 DDHD2O94830 711 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ALPPP05187 535 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 MMP2P08253 660 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 LINGO3P0C6S8 592 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 CCDC192P0DO97 292 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 TFPIP10646 304 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ALPPL2P10696 532 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ADRA2CP18825 462 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 EPORP19235 508 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ACADLP28330 430 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 TNFRSF8P28908 595 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 HOXA7P31268 230 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 HOXA11P31270 313 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 KHKP50053 298 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 CLCNKBP51801 687 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF75DP51815 510 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SLC26A5P58743 744 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SLC18A2Q05940 514 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 KLF10Q13118 480 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ARHGEF6Q15052 776 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 RPS6KA1Q15418 735 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 FAM98BQ52LJ0 330 aaKnown RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 C6orf136Q5SQH8 315 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 HEPHL1Q6MZM0 1159 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 CASC4Q6P4E1 433 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 LRIG3Q6UXM1 1119 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 Q6ZPA2 131 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 CYB5R4Q7L1T6 521 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 PPP1R42Q7Z4L9 355 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ABI3BPQ7Z7G0 1075 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ARHGEF25Q86VW2 580 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 CHSY1Q86X52 802 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SLC35F3Q8IY50 421 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 TIGD4Q8IY51 512 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ARL14EPQ8N8R7 260 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-207ENST00000476169 OR7G3Q8NG95 312 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SLC13A3Q8WWT9 602 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ROBO4Q8WZ75 1007 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 DNASE1L2Q92874 299 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 EXT2Q93063 718 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 IGSF8Q969P0 613 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SPSB1Q96BD6 273 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 SARAFQ96BY9 339 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 FBXL8Q96CD0 374 aa4.18□□□□□ -1.74
VPS13D-207ENST00000476169 ERLEC1Q96DZ1 483 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms