RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PSMD3O43242 534 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 KIF5CO60282 957 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 SUN1O94901 812 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 CAPNS1P04632 268 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 PROS1P07225 676 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 PDX1P52945 283 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 PEX6Q13608 980 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 POU6F1Q14863 301 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 TTC27Q6P3X3 843 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 DDHD1Q8NEL9 900 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 GDAP1Q8TB36 358 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 PBKQ96KB5 322 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 DNAJC1Q96KC8 554 aaKnown RBP18.7■□□□□ 0.58
PTCD3-210ENST00000473829 OSBPL9Q96SU4 736 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 PAK5Q9P286 719 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 TBC1D29Q9UFV1 150 aa18.7■□□□□ 0.58
PTCD3-210ENST00000473829 USP24Q9UPU5 2620 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 A0A1W2PQM1 296 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 A6NCN8 305 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 TRABD2BA6NFA1 517 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 ERI2A8K979 691 aaKnown RBP18.69■□□□□ 0.58
PTCD3-210ENST00000473829 GPR89AB7ZAQ6 455 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 VEGFDO43915 354 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 SRP72O76094 671 aaKnown RBP18.69■□□□□ 0.58
PTCD3-210ENST00000473829 CDK14O94921 469 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 GPR89BP0CG08 455 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 GLB1P16278 677 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 ACTN2P35609 894 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 TMEM115Q12893 351 aaPredicted RBP18.69■□□□□ 0.58
PTCD3-210ENST00000473829 ITGA9Q13797 1035 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 SEPT6Q14141 434 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 GPRC6AQ5T6X5 926 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 CACTIN-AS1Q8N1I8 211 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 ARL14Q8N4G2 192 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 ZNF398Q8TD17 642 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 CCDC97Q96F63 343 aaPredicted RBP18.69■□□□□ 0.58
PTCD3-210ENST00000473829 AP1M1Q9BXS5 423 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 SYNDIG1Q9H7V2 258 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 LRIT1Q9P2V4 623 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 APPL1Q9UKG1 709 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 TTC7AQ9ULT0 858 aaPredicted RBP18.69■□□□□ 0.58
PTCD3-210ENST00000473829 SNX12Q9UMY4 172 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 CELSR3Q9NYQ7 3312 aa18.69■□□□□ 0.58
PTCD3-210ENST00000473829 DMXL2Q8TDJ6 3036 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 CCDC78A2IDD5 438 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 PRR19A6NJB7 356 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 NTN3O00634 580 aaPredicted RBP18.68■□□□□ 0.58
PTCD3-210ENST00000473829 ZNF185O15231 689 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 NUDT21O43809 227 aaKnown RBP18.68■□□□□ 0.58
PTCD3-210ENST00000473829 CSO75390 466 aaKnown RBP18.68■□□□□ 0.58
PTCD3-210ENST00000473829 RPLP0P05388 317 aaKnown RBP18.68■□□□□ 0.58
PTCD3-210ENST00000473829 CTSCP53634 463 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 CCL7P80098 99 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 PDE1BQ01064 536 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 NFATC2Q13469 925 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 CCDC38Q502W7 563 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 GSTA5Q7RTV2 222 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 ZNF438Q7Z4V0 828 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 SPRED1Q7Z699 444 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 C11orf96Q7Z7L8 435 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 LINC00523Q86TU6 105 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 LRRTM4Q86VH4 590 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 CCNJLQ8IV13 435 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 RASGEF1AQ8N9B8 481 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 Q8N9G6 341 aaPredicted RBP18.68■□□□□ 0.58
PTCD3-210ENST00000473829 OR6C4Q8NGE1 309 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 MDM1Q8TC05 714 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 SLC37A2Q8TED4 501 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 NAT14Q8WUY8 206 aa18.68■□□□□ 0.58
PTCD3-210ENST00000473829 TRBV23OR9-2A0A075B6M9 112 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 E7EVH7 732 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 PGRMC1O00264 195 aaKnown RBP18.67■□□□□ 0.58
PTCD3-210ENST00000473829 PPM1DO15297 605 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 APRTP07741 180 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 ZNF7P17097 686 aaPredicted RBP18.67■□□□□ 0.58
PTCD3-210ENST00000473829 LMAN1P49257 510 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 CDH17Q12864 832 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 ISXQ2M1V0 245 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 LDLRAP1Q5SW96 308 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 PPP1R21Q6ZMI0 780 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 RBM44Q6ZP01 1051 aaKnown RBP18.67■□□□□ 0.58
PTCD3-210ENST00000473829 KDF1Q8NAX2 398 aaPredicted RBP18.67■□□□□ 0.58
PTCD3-210ENST00000473829 ZCCHC14Q8WYQ9 949 aaKnown RBP18.67■□□□□ 0.58
PTCD3-210ENST00000473829 DEPDC7Q96QD5 511 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 C19orf43Q9BQ61 176 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 FAM96AQ9H5X1 160 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 ASB8Q9H765 288 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 CASS4Q9NQ75 786 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 HOMER3Q9NSC5 361 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 KLC4Q9NSK0 619 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 NLE1Q9NVX2 485 aaPredicted RBP18.67■□□□□ 0.58
PTCD3-210ENST00000473829 DNAJC16Q9Y2G8 782 aa18.67■□□□□ 0.58
PTCD3-210ENST00000473829 EPG5Q9HCE0 2579 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 MROH6A6NGR9 719 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 AGAP14A8MT82 685 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 KMOO15229 486 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 SNX2O60749 519 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 PRSS56P0CW18 603 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 PNLIPP16233 465 aa18.66■□□□□ 0.58
PTCD3-210ENST00000473829 MC4RP32245 332 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms