RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 PATL1Q86TB9 770 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 OSTM1Q86WC4 334 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PSTKQ8IV42 348 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 DEFB107AQ8IZN7 70 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PGAM4Q8N0Y7 254 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 DAW1Q8N136 415 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CPSF7Q8N684 471 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FAM71DQ8N9W8 422 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SMYD1Q8NB12 490 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CHST14Q8NCH0 376 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CEP70Q8NHQ1 597 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FNDC8Q8TC99 324 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SH3RF2Q8TEC5 729 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PDCD6IPQ8WUM4 868 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CHAC2Q8WUX2 184 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 DNAJB3Q8WWF6 145 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 EME1Q96AY2 570 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 EFHD2Q96C19 240 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 NMD3Q96D46 503 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 RMND5BQ96G75 393 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 DCUN1D1Q96GG9 259 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ANKRD36BP1Q96IX9 119 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MAGED4Q96JG8 741 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CCDC138Q96M89 665 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ZNF558Q96NG5 402 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MCEEQ96PE7 176 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CPNE1Q99829 537 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MSTO1Q9BUK6 570 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 KIFC3Q9BVG8 833 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SLC13A1Q9BZW2 595 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 BRD8Q9H0E9 1235 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 C2orf40Q9H1Z8 148 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MUC13Q9H3R2 512 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PDZD7Q9H5P4 517 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SMYD3Q9H7B4 428 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CAAP1Q9H8G2 361 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SFXN1Q9H9B4 322 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 EML4Q9HC35 981 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SMURF1Q9HCE7 757 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PREBQ9HCU5 417 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 TRPC7Q9HCX4 862 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 EIF2B3Q9NR50 452 aaKnown RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FBXO6Q9NRD1 293 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SEMA4GQ9NTN9 838 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ATAD3AQ9NVI7 634 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 FAIMQ9NVQ4 179 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 GID8Q9NWU2 228 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ZSCAN32Q9NX65 697 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 RBAKQ9NYW8 714 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 CLIC5Q9NZA1 410 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 PKD2L2Q9NZM6 624 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 RCOR3Q9P2K3 495 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-214ENST00000473177 MYOTQ9UBF9 498 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 GNPTGQ9UJJ9 305 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 SRPK3Q9UPE1 567 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 B3GNT3Q9Y2A9 372 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 TMED5Q9Y3A6 229 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 NRCAMQ92823 1304 aa4.91□□□□□ -1.62
LRCH3-214ENST00000473177 ATRXP46100 2492 aa4.9□□□□□ -1.62
LRCH3-214ENST00000473177 TCRBV5S2A0A599 114 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ARHGEF37A1IGU5 675 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TYW5A2RUC4 315 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 GOLGA8IPA6NC78 632 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 GOLGA8JA6NMD2 632 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 C16orf96A6NNT2 1141 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 GOLGA8SH3BPF8 625 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 GOLGA8MH3BSY2 632 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 GOLGA8RI6L899 631 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 KPNA4O00629 521 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 MAN2B1O00754 1011 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 HDAC3O15379 428 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 NCAM2O15394 837 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 HNRNPRO43390 633 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SNAP91O60641 907 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TRIM13O60858 407 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 LRP3O75074 770 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 KATNA1O75449 491 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 BCAS2O75934 225 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ALDH1A2O94788 518 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ASS1P00966 412 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 RPLP2P05387 115 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ADRB2P07550 413 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 RETP07949 1114 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZSCAN5DPP0CG00 497 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 PGAM1P18669 254 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ACO1P21399 889 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TKTP29401 623 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TYK2P29597 1187 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 VIPR1P32241 457 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 CPOXP36551 454 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 GP5P40197 560 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 RPL14P50914 215 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZNF132P52740 706 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 ZNF135P52742 658 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 EPHA5P54756 1037 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 EPHB1P54762 984 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 MRPS6P82932 125 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 TXNL4AP83876 142 aaKnown RBP4.9□□□□□ -1.63
LRCH3-214ENST00000473177 SP4Q02446 784 aa4.9□□□□□ -1.63
LRCH3-214ENST00000473177 OCA2Q04671 838 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms