RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 CDK14O94921 469 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 SEC31AO94979 1220 aaKnown RBP20.55■□□□□ 0.88
TOP3A-204ENST00000472959 ZNF8P17098 575 aaPredicted RBP20.55■□□□□ 0.88
TOP3A-204ENST00000472959 ARSDP51689 593 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 GTF2H3Q13889 308 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 ZRANB3Q5FWF4 1079 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 ZNF648Q5T619 568 aaPredicted RBP20.55■□□□□ 0.88
TOP3A-204ENST00000472959 TAF8Q7Z7C8 310 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 NXPE1Q8N323 547 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 GPBAR1Q8TDU6 330 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 HDAC10Q969S8 669 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 ZNF778Q96MU6 729 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 TREX1Q9NSU2 369 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 SAMD15Q9P1V8 674 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 FTSJ1Q9UET6 329 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 SLC2A6Q9UGQ3 507 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 SOX13Q9UN79 622 aa20.55■□□□□ 0.88
TOP3A-204ENST00000472959 TRBV5-4A0A0C4DH59 114 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 CCDC162PA2VCL2 907 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 GPR39O43194 453 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 GRID2O43424 1007 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 SIGLEC6O43699 453 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 KCNK5O95279 499 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 LDOC1O95751 146 aaPredicted RBP20.54■□□□□ 0.88
TOP3A-204ENST00000472959 MSH3P20585 1137 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 NOVA1P51513 510 aaKnown RBP20.54■□□□□ 0.88
TOP3A-204ENST00000472959 PRAMEP78395 509 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 TRIP6Q15654 476 aaKnown RBP20.54■□□□□ 0.88
TOP3A-204ENST00000472959 DEFB133Q30KQ1 61 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 KHDC1Q4VXA5 237 aaKnown RBP20.54■□□□□ 0.88
TOP3A-204ENST00000472959 HIBCHQ6NVY1 386 aaPredicted RBP20.54■□□□□ 0.88
TOP3A-204ENST00000472959 ZCCHC8Q6NZY4 707 aaKnown RBP20.54■□□□□ 0.88
TOP3A-204ENST00000472959 CASC4Q6P4E1 433 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 AFTPHQ6ULP2 937 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 GLRX5Q86SX6 157 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 FAM181AQ8N9Y4 354 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 TRIM31Q9BZY9 425 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 NCKIPSDQ9NZQ3 722 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 ANAPC5Q9UJX4 755 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 UTP11Q9Y3A2 253 aaKnown RBP20.54■□□□□ 0.88
TOP3A-204ENST00000472959 SCN8AQ9UQD0 1980 aa20.54■□□□□ 0.88
TOP3A-204ENST00000472959 DMXL1Q9Y485 3027 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 TNFSF14O43557 240 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 MTX2O75431 263 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 CELA2BP08218 269 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-204ENST00000472959 RALBP11234 206 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 AKT1P31749 480 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 CA5AP35218 305 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 ITGA8P53708 1063 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 CTBSQ01459 385 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 DNAJC21Q5F1R6 531 aaKnown RBP20.53■□□□□ 0.88
TOP3A-204ENST00000472959 TAS2R42Q7RTR8 314 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 OR6P1Q8NGX9 317 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.53■□□□□ 0.88
TOP3A-204ENST00000472959 DCUN1D1Q96GG9 259 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 ZNF514Q96K75 400 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-204ENST00000472959 CNDP2Q96KP4 475 aaKnown RBP20.53■□□□□ 0.88
TOP3A-204ENST00000472959 TTC1Q99614 292 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 COPS8Q99627 209 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 RAB17Q9H0T7 212 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 FAM96AQ9H5X1 160 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 EVA1BQ9NVM1 165 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 SNX24Q9Y343 169 aa20.53■□□□□ 0.88
TOP3A-204ENST00000472959 TP53BP1Q12888 1972 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-204ENST00000472959 FAM237BA0A1B0GVD1 139 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 CTAGE15A4D2H0 777 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 CFAP99D6REC4 459 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 KMOO15229 486 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 GOT2P00505 430 aaKnown RBP20.52■□□□□ 0.88
TOP3A-204ENST00000472959 CTAGE8P0CG41 777 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 PAMP19021 973 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 ACRV1P26436 265 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 NMBRP28336 390 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 FOXN2P32314 431 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 RPL21P46778 160 aaKnown RBP20.52■□□□□ 0.88
TOP3A-204ENST00000472959 MRPS25P82663 173 aaKnown RBP20.52■□□□□ 0.88
TOP3A-204ENST00000472959 PROX2Q3B8N5 592 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 C6orf132Q5T0Z8 1188 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 LYPLAL1Q5VWZ2 237 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 DUPD1Q68J44 220 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 PSAPL1Q6NUJ1 521 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 CERS6Q6ZMG9 384 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 CTAGE6Q86UF2 777 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 LRRTM4Q86VH4 590 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 SERPINA9Q86WD7 417 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 NRROSQ86YC3 692 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 CTAGE4Q8IX94 777 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 PDIK1LQ8N165 341 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 MPP5Q8N3R9 675 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 RASGEF1AQ8N9B8 481 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 FAM46DQ8NEK8 389 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 OR4L1Q8NH43 312 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 CCL4L1Q8NHW4 92 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 GLMNQ92990 594 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 SIGLEC10Q96LC7 697 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 BOCQ9BWV1 1114 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 ZDHHC3Q9NYG2 299 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 WHRNQ9P202 907 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 GPR34Q9UPC5 381 aa20.52■□□□□ 0.88
TOP3A-204ENST00000472959 PRKAB1Q9Y478 270 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms