RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TLX3O43711 291 aaPredicted RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 AP1G1O43747 822 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 FZD7O75084 574 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 RTN2O75298 545 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 USP12O75317 370 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CSO75390 466 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 DAB1O75553 588 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 PIAS2O75928 621 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ZNF202O95125 648 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 PCDH8O95206 1070 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 IGLV3-25P01717 112 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 AFPP02771 609 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 CSF2P04141 144 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 RHOCP08134 193 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ALPIP09923 528 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 DGKAP23743 735 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ITPKBP27987 946 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 HTR1BP28222 390 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 MAT2AP31153 395 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 DRD3P35462 400 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 RGS7P49802 495 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 NDUFA8P51970 172 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 THOP1P52888 689 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 MANFP55145 182 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 BPIFB4P59827 614 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 RAC3P60763 192 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 YPEL5P62699 121 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 RAD51Q06609 339 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CCDC173Q0VFZ6 552 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CNTN1Q12860 1018 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 SGCGQ13326 291 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 SPIDRQ14159 915 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 KCNJ12Q14500 433 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 GRM3Q14832 879 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 POLD3Q15054 466 aaPredicted RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 ELOCQ15369 112 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 DLG2Q15700 870 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CLPPQ16740 277 aaPredicted RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 ARL13BQ3SXY8 428 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 KCNT1Q5JUK3 1230 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 PRAMEF9Q5VWM5 478 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 RAP1GAP2Q684P5 730 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 LVRNQ6Q4G3 990 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 KDM7AQ6ZMT4 941 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 C11orf57Q6ZUT1 292 aaPredicted RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 ERN2Q76MJ5 926 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 ABI3BPQ7Z7G0 1075 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CLEC14AQ86T13 490 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 TMEM110Q86TL2 294 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CMIPQ8IY22 773 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ELOA2Q8IYF1 753 aaPredicted RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 STK40Q8N2I9 435 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 SH2D3CQ8N5H7 860 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 PCDH20Q8N6Y1 951 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 UBR7Q8N806 425 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ARL10Q8N8L6 244 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ATP11CQ8NB49 1132 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CLRN3Q8NCR9 226 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CCDC112Q8NEF3 446 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ZNF548Q8NEK5 533 aaPredicted RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 UBA3Q8TBC4 463 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 IFI44Q8TCB0 444 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 WFDC5Q8TCV5 224 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 CASKIN2Q8WXE0 1202 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ASB12Q8WXK4 309 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 SEMA4DQ92854 862 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 EXTL1Q92935 676 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 FEM1CQ96JP0 617 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 LMLNQ96KR4 655 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 RPL10LQ96L21 214 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 APOLD1Q96LR9 279 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 TIGD1Q96MW7 591 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 BBC3Q96PG8 261 aaPredicted RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 SLC2A13Q96QE2 648 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 TUBGCP5Q96RT8 1024 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 FEM1AQ9BSK4 669 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 SLC13A1Q9BZW2 595 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 B3GNT4Q9C0J1 378 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 DNAJC28Q9NX36 388 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 SPASTQ9UBP0 616 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 IL36AQ9UHA7 158 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 HPCAL4Q9UM19 191 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D30Q9Y2I9 924 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 PCDHGA7Q9Y5G6 932 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRN1-209ENST00000472625 SETXQ7Z333 2677 aaKnown RBP3.55□□□□□ -1.84
XRN1-209ENST00000472625 PI4KAP42356 2102 aa3.55□□□□□ -1.84
XRN1-209ENST00000472625 ZNF462Q96JM2 2506 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 URB1O60287 2271 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 MAST4O15021 2626 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 CCDC187A0A096LP49 1063 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 SPTY2D1-AS1A0A0U1RR47 76 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 ILVBLA1L0T0 632 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 GTPBP10A4D1E9 387 aaKnown RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 EME2A4GXA9 379 aaPredicted RBP3.54□□□□□ -1.84
XRN1-209ENST00000472625 E5RJQ4 531 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 LMO7DNF2Z398 122 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 K7ENP7 123 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 TULP2O00295 520 aa3.54□□□□□ -1.84
XRN1-209ENST00000472625 AQP9O43315 295 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms