RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SCRN2Q96FV2 425 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 BBC3Q96PG8 261 aaPredicted RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 PPP1R2P1Q96PQ5 205 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 TBL1YQ9BQ87 522 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 APOL2Q9BQE5 337 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 LRRC61Q9BV99 259 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 ADGRE3Q9BY15 652 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 NRSN2Q9GZP1 204 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 GOLGA6AQ9NYA3 693 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 NOP53Q9NZM5 478 aaKnown RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 PAK5Q9P286 719 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 AAR2Q9Y312 384 aaKnown RBP9.1□□□□□ -0.95
SMC4-213ENST00000472282 AK5Q9Y6K8 562 aa9.1□□□□□ -0.95
SMC4-213ENST00000472282 BPTFQ12830 3046 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 C1orf232A0A0U1RR37 186 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 LOC285095A0A1B0GVY8 99 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 A0A1W2PNU3 283 aaPredicted RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 CPED1A4D0V7 1026 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 PMS2P1A4D2B8 440 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 NEMP2A6NFY4 417 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 KIF2AO00139 706 aaPredicted RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 BRINP1O60477 761 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 CLDN7O95471 211 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 AGTP01019 485 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 EPOP01588 193 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 KRT14P02533 472 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 FGF1P05230 155 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 EPXP11678 715 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 ZNF30P17039 623 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 HLA-DPA1P20036 260 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 ADRA1AP35348 466 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 EIF2S3P41091 472 aaKnown RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 VPS41P49754 854 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 THOP1P52888 689 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 E2F1Q01094 437 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 CTBSQ01459 385 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 SPARCL1Q14515 664 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 ACOX1Q15067 660 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 TRIP13Q15645 432 aaPredicted RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 SLC1A5Q15758 541 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 ALG11Q2TAA5 492 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 SOWAHCQ53LP3 525 aaPredicted RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 PRRT3Q5FWE3 981 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 KCTD11Q693B1 232 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 CCDC70Q6NSX1 233 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 ZCCHC8Q6NZY4 707 aaKnown RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 HSD11B1LQ7Z5J1 315 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 KLHL7Q8IXQ5 586 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 SLC35F3Q8IY50 421 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 CACTIN-AS1Q8N1I8 211 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 PELI3Q8N2H9 469 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 PLA2G15Q8NCC3 412 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 IFI44Q8TCB0 444 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 GRK7Q8WTQ7 553 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 TSACCQ96A04 125 aaPredicted RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 LYSMD1Q96S90 227 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 LRRC40Q9H9A6 602 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 RNF14Q9UBS8 474 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 APOBEC3BQ9UH17 382 aaKnown RBP9.09□□□□□ -0.95
SMC4-213ENST00000472282 ZNF711Q9Y462 761 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 SPO11Q9Y5K1 396 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 CSNK1G3Q9Y6M4 447 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 CELSR3Q9NYQ7 3312 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 FREM2Q5SZK8 3169 aa9.09□□□□□ -0.95
SMC4-213ENST00000472282 EME2A4GXA9 379 aaPredicted RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 E7EVH7 732 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 CCDC188H7C350 402 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 PSMD11O00231 422 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 ATXN7O15265 892 aaPredicted RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 PSMD3O43242 534 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 CSO75390 466 aaKnown RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 RECQL5O94762 991 aaPredicted RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 URI1O94763 535 aaPredicted RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 ECEL1O95672 775 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 AP2A1O95782 977 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 GAS8O95995 478 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 MPOP05164 745 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 PCCBP05166 539 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 ALPPL2P10696 532 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 TSHRP16473 764 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 COL8A1P27658 744 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 ETV3P41162 512 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 LMAN1P49257 510 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 STC1P52823 247 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 TERF1P54274 439 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 YPEL5P62699 121 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 BASP1P80723 227 aaKnown RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 C2orf54Q08AI8 447 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 SEMA5AQ13591 1074 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 COL9A2Q14055 689 aaPredicted RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 INPP5AQ14642 412 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 LRRC14Q15048 493 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 RANBP10Q6VN20 620 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 MACC1Q6ZN28 852 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 RFLNAQ6ZTI6 216 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 Q6ZVL8 140 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 EFL1Q7Z2Z2 1120 aaKnown RBP9.08□□□□□ -0.96
SMC4-213ENST00000472282 SFTPA2Q8IWL1 248 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 BLOC1S5Q8TDH9 187 aa9.08□□□□□ -0.96
SMC4-213ENST00000472282 LRRC45Q96CN5 670 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms