RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
CCM2-205ENST00000472223 ZNF514Q96K75 400 aaPredicted RBP16.69■□□□□ 0.26
CCM2-205ENST00000472223 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
CCM2-205ENST00000472223 VPS18Q9P253 973 aa16.69■□□□□ 0.26
CCM2-205ENST00000472223 GMEB2Q9UKD1 530 aa16.69■□□□□ 0.26
CCM2-205ENST00000472223 ATXN2Q99700 1313 aaKnown RBP16.69■□□□□ 0.26
CCM2-205ENST00000472223 UQCRHLA0A096LP55 91 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 TNFRSF10CO14798 259 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 SOD1P00441 154 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 CFIP05156 583 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 IVLP07476 585 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 UQCRHP07919 91 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 ATP1B2P14415 290 aaPredicted RBP16.68■□□□□ 0.26
CCM2-205ENST00000472223 CDKN1CP49918 316 aaPredicted RBP16.68■□□□□ 0.26
CCM2-205ENST00000472223 BLKP51451 505 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 IFFO1Q0D2I5 559 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 TCF15Q12870 199 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 SLC29A2Q14542 456 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 DBN1Q16643 649 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 KBTBD12Q3ZCT8 623 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 LGSNQ5TDP6 509 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 PTRHD1Q6GMV3 140 aaKnown RBP16.68■□□□□ 0.26
CCM2-205ENST00000472223 MACC1Q6ZN28 852 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 TAOK1Q7L7X3 1001 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 CNTN4Q8IWV2 1026 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 PIANPQ8IYJ0 282 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 UNC5BQ8IZJ1 945 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 PPM1NQ8N819 430 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 HNRNPLLQ8WVV9 542 aaKnown RBP16.68■□□□□ 0.26
CCM2-205ENST00000472223 COX14Q96I36 57 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 ORAI3Q9BRQ5 295 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 TXLNGYQ9BZA5 131 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 OR2AG1Q9H205 316 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 ARFGAP3Q9NP61 516 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 KLQ9UEF7 1012 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 GNPTGQ9UJJ9 305 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 CNOT6Q9ULM6 557 aaKnown RBP16.68■□□□□ 0.26
CCM2-205ENST00000472223 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
CCM2-205ENST00000472223 PCDHB1Q9Y5F3 818 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 FANCMQ8IYD8 2048 aa16.68■□□□□ 0.26
CCM2-205ENST00000472223 EXOC1LA0A1B0GW35 172 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 FAM159BA6NKW6 160 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 H3BMM5 538 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 PRMT5O14744 637 aaPredicted RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 AP2A2O94973 939 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 EPN2O95208 641 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 TNFP01375 233 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 SYPP08247 313 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 INHBAP08476 426 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 OR56A5P0C7T3 313 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 SLC1A2P43004 574 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 MSH2P43246 934 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 CSNK1EP49674 416 aaKnown RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 PPARDQ03181 441 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 UAP1Q16222 522 aaPredicted RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 TYSND1Q2T9J0 566 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 PACS1Q6VY07 963 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 STRA8Q7Z7C7 330 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 LDB1Q86U70 411 aaPredicted RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 TRIM74Q86UV6 250 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 DENND6AQ8IWF6 608 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 PELI3Q8N2H9 469 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 OXR1Q8N573 874 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 C2CD4AQ8NCU7 369 aaPredicted RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 UHMK1Q8TAS1 419 aaKnown RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 CPNE1Q99829 537 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 LGR4Q9BXB1 951 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 NUSAP1Q9BXS6 441 aaKnown RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 ACSS3Q9H6R3 686 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 MARCH4Q9P2E8 410 aaPredicted RBP16.67■□□□□ 0.26
CCM2-205ENST00000472223 ZNHIT2Q9UHR6 403 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 RABGEF1Q9UJ41 708 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 TMEM98Q9Y2Y6 226 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 COMMD10Q9Y6G5 202 aa16.67■□□□□ 0.26
CCM2-205ENST00000472223 SPTY2D1-AS1A0A0U1RR47 76 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 A0A1W2PR77 199 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 POC1B-GALNT4F8VUJ3 575 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 H3BM21 787 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 GPR39O43194 453 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 MTX2O75431 263 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 RASGRP1O95267 797 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 PRSS56P0CW18 603 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 VCLP18206 1134 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 HSD17B3P37058 310 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 LEPRP48357 1165 aaKnown RBP16.66■□□□□ 0.26
CCM2-205ENST00000472223 CD151P48509 253 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 EIF3BP55884 814 aaKnown RBP16.66■□□□□ 0.26
CCM2-205ENST00000472223 GRTP1Q5TC63 336 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 IL27RAQ6UWB1 636 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 MARK2Q7KZI7 788 aaKnown RBP16.66■□□□□ 0.26
CCM2-205ENST00000472223 GALNT7Q86SF2 657 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 ADGRG6Q86SQ4 1221 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 PARGQ86W56 976 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 GALNT13Q8IUC8 556 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 TRAPPC5Q8IUR0 188 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 MREGQ8N565 214 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 C1orf216Q8TAB5 229 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 PANX3Q96QZ0 392 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 FUT8Q9BYC5 575 aa16.66■□□□□ 0.26
CCM2-205ENST00000472223 SLC13A1Q9BZW2 595 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms