RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 BRINP2Q9C0B6 783 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 LEF1Q9UJU2 399 aaPredicted RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 H3BQ06 376 aaPredicted RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 H3BQF6 201 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 BIRC5O15392 142 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 CHRNA4P43681 627 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 MED27Q6P2C8 311 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 TPRG1Q6ZUI0 275 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 LRRTM4Q86VH4 590 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 GKN2Q86XP6 184 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 DPP10Q8N608 796 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 ZCCHC10Q8TBK6 192 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 ZNF490Q9ULM2 529 aaPredicted RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 PPIEQ9UNP9 301 aaKnown RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 IPO13O94829 963 aaKnown RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 ZNF30P17039 623 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 AVPR1BP47901 424 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 PHF19Q5T6S3 580 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 C9orf64Q5T6V5 341 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 NCBP2-AS2Q69YL0 99 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 LMX1AQ8TE12 382 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 KLHDC7BQ96G42 594 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 PANX1Q96RD7 426 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 LRRC4CQ9HCJ2 640 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 ENOPH1Q9UHY7 261 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 H3BN98 237 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 FYNP06241 537 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 FASP25445 335 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 PTPN4P29074 926 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 STXBP1P61764 594 aaKnown RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 RALGPS1Q5JS13 557 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 TTC33Q6PID6 262 aaPredicted RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 CASP12Q6UXS9 341 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 ZNF852Q6ZMS4 543 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 FAM20CQ8IXL6 584 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 EID3Q8N140 333 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 SIDT2Q8NBJ9 832 aaKnown RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 ITFG1Q8TB96 612 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 MYCBPQ99417 103 aaPredicted RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 VRTNQ9H8Y1 702 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 INTS10Q9NVR2 710 aaKnown RBP12.17□□□□□ -0.46
IRF1-208ENST00000472045 OSER1Q9NX31 292 aa12.17□□□□□ -0.46
IRF1-208ENST00000472045 HDAC3O15379 428 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 CLDN9O95484 217 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 EML3Q32P44 896 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 ZNF549Q6P9A3 640 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 SLC22A18Q96BI1 424 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 SHISA4Q96DD7 197 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 NPY6RQ99463 290 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 ARMCX1Q9P291 453 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 PCDHB11Q9Y5F2 797 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 GABRDO14764 452 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 CCND1P24385 295 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 GRIA2P42262 883 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 CTSOP43234 321 aaPredicted RBP12.16□□□□□ -0.46
IRF1-208ENST00000472045 BST1Q10588 318 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 LYSMD3Q7Z3D4 306 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 CPNE9Q8IYJ1 553 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 RNF145Q96MT1 663 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 PRRG4Q9BZD6 226 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 ZDHHC3Q9NYG2 299 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 POLR3HQ9Y535 204 aaPredicted RBP12.16□□□□□ -0.46
IRF1-208ENST00000472045 PIAS3Q9Y6X2 628 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 HSPA7P48741 367 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 CLK1P49759 484 aaKnown RBP12.16□□□□□ -0.46
IRF1-208ENST00000472045 HK2P52789 917 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 RPL6Q02878 288 aaKnown RBP12.16□□□□□ -0.46
IRF1-208ENST00000472045 PLEKHG6Q3KR16 790 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 KIAA0930Q6ICG6 404 aaPredicted RBP12.16□□□□□ -0.46
IRF1-208ENST00000472045 PRSS58Q8IYP2 241 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 SLC44A1Q8WWI5 657 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 APOLD1Q96LR9 279 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 BTBD9Q96Q07 612 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 ADAM7Q9H2U9 754 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 SUCOQ9UBS9 1254 aaKnown RBP12.16□□□□□ -0.46
IRF1-208ENST00000472045 ZNF840PA6NDX5 716 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 KAT7O95251 611 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 NT5EP21589 574 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 IL1R2P27930 398 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 RCN1Q15293 331 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 ANKRD22Q5VYY1 191 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 RNF44Q7L0R7 432 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 CUZD1Q86UP6 607 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 COMMD2Q86X83 199 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 TMPRSS6Q8IU80 811 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 NXNL1Q96CM4 212 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 BDH2Q9BUT1 245 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 IPPKQ9H8X2 491 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 MRPS30Q9NP92 439 aaKnown RBP12.16□□□□□ -0.46
IRF1-208ENST00000472045 GJD2Q9UKL4 321 aa12.16□□□□□ -0.46
IRF1-208ENST00000472045 ATP6AP2A0A1C7CYW4 349 aa12.15□□□□□ -0.46
IRF1-208ENST00000472045 TTC24A2A3L6 582 aaPredicted RBP12.15□□□□□ -0.46
IRF1-208ENST00000472045 UGT1A9O60656 530 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms