RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TAS2R39P59534 338 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 EIF2B5Q13144 721 aaKnown RBP9.78□□□□□ -0.84
SF3A1-207ENST00000471342 LAMB3Q13751 1172 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 ARHGEF7Q14155 803 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 MPP2Q14168 576 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 STAT4Q14765 748 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 LRRC14Q15048 493 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF470Q6ECI4 717 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 LRIG3Q6UXM1 1119 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 KIAA0408Q6ZU52 694 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 HEATR4Q86WZ0 1026 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 NRROSQ86YC3 692 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 LMNTD2Q8IXW0 634 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 NDUFAF2Q8N183 169 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 PGBD3Q8N328 593 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 PPM1NQ8N819 430 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 OR13H1Q8NG92 308 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 OR6P1Q8NGX9 317 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 OR1E3Q8WZA6 343 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 TLCD1Q96CP7 247 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 SERAC1Q96JX3 654 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 TCF12Q99081 682 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 CYTH2Q99418 400 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 RBBP8Q99708 897 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 APOOQ9BUR5 198 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 ASB8Q9H765 288 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 VIPAS39Q9H9C1 493 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 VPS37BQ9H9H4 285 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 FGF22Q9HCT0 170 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 CATSPERZQ9NTU4 200 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 ZDHHC3Q9NYG2 299 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 SAMD15Q9P1V8 674 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 BCCIPQ9P287 314 aaKnown RBP eCLIP9.78□□□□□ -0.84
SF3A1-207ENST00000471342 APPL1Q9UKG1 709 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 TMEM98Q9Y2Y6 226 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 PKP3Q9Y446 797 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 LAMA1P25391 3075 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 TNRC6BQ9UPQ9 1833 aaKnown RBP9.77□□□□□ -0.84
SF3A1-207ENST00000471342 LRRC72A6NJI9 287 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 DYNC1I1O14576 645 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 INPP4BO15327 924 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 LZTS3O60299 673 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 FSBPO95073 299 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TOP3BO95985 862 aaKnown RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 PCCBP05166 539 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 GIMD1P0DJR0 217 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 FDXRP22570 491 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 XPAP23025 273 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 ITPKAP23677 461 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 CD27P26842 260 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 CCR7P32248 378 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 STX2P32856 288 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 GP5P40197 560 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 KCNC1P48547 511 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 KIAA1024LP59773 190 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TMEM115Q12893 351 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 FZD2Q14332 565 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 ITIH4Q14624 930 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 BCL7AQ4VC05 210 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TTMPQ5BVD1 217 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 PPM1JQ5JR12 505 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 CFAP58Q5T655 872 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 ZDHHC20Q5W0Z9 365 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 KYAT3Q6YP21 454 aaKnown RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 FAM83HQ6ZRV2 1179 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 KANSL1Q7Z3B3 1105 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 STRA8Q7Z7C7 330 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 CLEC14AQ86T13 490 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 PIM3Q86V86 326 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 LRRC6Q86X45 466 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 VRK3Q8IV63 474 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 SUMF1Q8NBK3 374 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 GANCQ8TET4 914 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 ANKRD49Q8WVL7 239 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 UBLCP1Q8WVY7 318 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 FOXJ1Q92949 421 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 SGF29Q96ES7 293 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 UBXN10Q96LJ8 280 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 LINC00615Q96LM1 132 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 CPNE1Q99829 537 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 AARSD1Q9BTE6 412 aaKnown RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 ZSCAN5AQ9BUG6 496 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 SPATA16Q9BXB7 569 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TWSG1Q9GZX9 223 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TCEAL2Q9H3H9 227 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 RHOJQ9H4E5 214 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 CAB39LQ9H9S4 337 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TMBIM4Q9HC24 238 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TRIM39Q9HCM9 518 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TM9SF3Q9HD45 589 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TM7SF3Q9NS93 570 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 INTS10Q9NVR2 710 aaKnown RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 ZSCAN32Q9NX65 697 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 EIF2B4Q9UI10 523 aaKnown RBP9.77□□□□□ -0.85
SF3A1-207ENST00000471342 SLC24A2Q9UI40 661 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 PILRBQ9UKJ0 227 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 DMTF1Q9Y222 760 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 PLEKHM1Q9Y4G2 1056 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 TRPM6Q9BX84 2022 aa9.77□□□□□ -0.85
SF3A1-207ENST00000471342 CUL9Q8IWT3 2517 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms