RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 BECN1Q14457 450 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 DPYSL2Q16555 572 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 CACHD1Q5VU97 1274 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 CDKAL1Q5VV42 579 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 FAM92BQ6ZTR7 304 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 POLNQ7Z5Q5 900 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 TEX26Q8N6G2 289 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 NEK11Q8NG66 645 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 PRR7Q8TB68 274 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 KLHL6Q8WZ60 621 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 SEC14L1Q92503 715 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 RSC1A1Q92681 617 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 PCMTD1Q96MG8 357 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 GPR87Q9BY21 358 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ING2Q9H160 280 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 CARD9Q9H257 536 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 OSGEPL1Q9H4B0 414 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 CLSTN2Q9H4D0 955 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 FAM83DQ9H4H8 585 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ACSS2Q9NR19 701 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZNF624Q9P2J8 865 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 DNPEPQ9ULA0 475 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ADGRG1Q9Y653 693 aa12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 ANKRD17O75179 2603 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-216ENST00000469400 CELSR2Q9HCU4 2923 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 LRBAP50851 2863 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 WIPF3A6NGB9 483 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 ARGFXA6NJG6 315 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 ATP1A3P13637 1013 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 NELFEP18615 380 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 IL1R2P27930 398 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 CAPZBP47756 277 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 SMTNL2Q2TAL5 461 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZNF648Q5T619 568 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 JMJD6Q6NYC1 403 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 TICAM1Q8IUC6 712 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 ENOX1Q8TC92 643 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 CSPG4P5Q96PW8 444 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 TDRD1Q9BXT4 1180 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 POLR1EQ9GZS1 481 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 OR2AG1Q9H205 316 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 ARFGAP3Q9NP61 516 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 LUZP4Q9P127 313 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLC23A2Q9UGH3 650 aa12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-216ENST00000469400 C1orf232A0A0U1RR37 186 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 FOLR1P15328 257 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 DSC2Q02487 901 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 TUBB3Q13509 450 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 IL10RAQ13651 578 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 LAMB3Q13751 1172 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 CHRNA6Q15825 494 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 SEPT7Q16181 437 aaKnown RBP12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 IRGCQ6NXR0 463 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 CYB5D1Q6P9G0 228 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 CRTC3Q6UUV7 619 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 SYVN1Q86TM6 617 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 Q8NA96 180 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 LPCAT1Q8NF37 534 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 HSPH1Q92598 858 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 SYT11Q9BT88 431 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLC29A3Q9BZD2 475 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLC40A1Q9NP59 571 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 SLAMF7Q9NQ25 335 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 POT1Q9NUX5 634 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 PKD2L2Q9NZM6 624 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 EPHA6Q9UF33 1036 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 RARRES3Q9UL19 164 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 ZNF451Q9Y4E5 1061 aa12.61□□□□□ -0.39
TRAPPC12-216ENST00000469400 IGHV5-51A0A0C4DH38 117 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 RGSL1A5PLK6 1076 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 CEACAM4O75871 244 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 MTA2O94776 668 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 LDLRP01130 860 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 CCDC172P0C7W6 258 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 BRAFP15056 766 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 TCF4P15884 667 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 FERP16591 822 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 SERPINB6P35237 376 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 PCK1P35558 622 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 RPL26P61254 145 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 PPP1CAP62136 330 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 RPS15P62841 145 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 GPR18Q14330 331 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 KCNAB1Q14722 419 aa12.6□□□□□ -0.39
TRAPPC12-216ENST00000469400 INSCQ1MX18 579 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms