RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ZNF768Q9H5H4 540 aaKnown RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 ARFGAP3Q9NP61 516 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 KLC4Q9NSK0 619 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 PKD2L2Q9NZM6 624 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 ZNF624Q9P2J8 865 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 AMACRQ9UHK6 382 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 RPL26L1Q9UNX3 145 aaKnown RBP12.9□□□□□ -0.34
PTPN7-207ENST00000468385 TTLL3Q9Y4R7 772 aa12.9□□□□□ -0.34
PTPN7-207ENST00000468385 KATNA1O75449 491 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 RFPL1O75677 317 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 NDUFA10O95299 355 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 PDGFAP04085 211 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 FGF5P12034 268 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 SKILP12757 684 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 CA4P22748 312 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 CCNCP24863 283 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 LEPRP48357 1165 aaKnown RBP12.89□□□□□ -0.35
PTPN7-207ENST00000468385 ARSEP51690 589 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 KLHL30Q0D2K2 578 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 IL11RAQ14626 422 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 ANKRD20A8PQ5CZ79 823 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 HIST2H2BCQ6DN03 193 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 RASGRP3Q8IV61 690 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 LRRN4Q8WUT4 740 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 STAMBPL1Q96FJ0 436 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 ELMO2Q96JJ3 720 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 TSGA13Q96PP4 275 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 MLPHQ9BV36 600 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-207ENST00000468385 OR2AG1Q9H205 316 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 OSGEPL1Q9H4B0 414 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 LRRC4CQ9HCJ2 640 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 DTLQ9NZJ0 730 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 SLC23A2Q9UGH3 650 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 KCND3Q9UK17 655 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 TLK1Q9UKI8 766 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 PCDHGA6Q9Y5G7 932 aa12.89□□□□□ -0.35
PTPN7-207ENST00000468385 USP9YO00507 2555 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-207ENST00000468385 ZNF106Q9H2Y7 1883 aaKnown RBP12.89□□□□□ -0.35
PTPN7-207ENST00000468385 CDC14CA4D256 554 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 ANKRD66B4E2M5 251 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 CHUKO15111 745 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
PTPN7-207ENST00000468385 SPAG6O75602 509 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 CREG1O75629 220 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 VIPP01282 170 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 MMP2P08253 660 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 AMD1P17707 334 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
PTPN7-207ENST00000468385 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 PMS2P54278 862 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 DPYSL3Q14195 570 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
PTPN7-207ENST00000468385 PLA2G4EQ3MJ16 856 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 CCDC122Q5T0U0 273 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 PRSS42Q7Z5A4 293 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 ADGRG6Q86SQ4 1221 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 KLHL6Q8WZ60 621 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 RSC1A1Q92681 617 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 THAP2Q9H0W7 228 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 TRIM39Q9HCM9 518 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 ANAPC7Q9UJX3 599 aa12.88□□□□□ -0.35
PTPN7-207ENST00000468385 GPR89AB7ZAQ6 455 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 RASSF9O75901 435 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 DNAJB5O75953 348 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 SLC25A14O95258 325 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-207ENST00000468385 TIAF1O95411 115 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 RECKO95980 971 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 GPR89BP0CG08 455 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 BRAFP15056 766 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 CD86P42081 329 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 CAPZBP47756 277 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 SEMA5AQ13591 1074 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 SEPT7Q16181 437 aaKnown RBP12.87□□□□□ -0.35
PTPN7-207ENST00000468385 INSCQ1MX18 579 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN7-207ENST00000468385 ATP13A4Q4VNC1 1196 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 TDRD12Q587J7 1177 aaKnown RBP12.87□□□□□ -0.35
PTPN7-207ENST00000468385 ZNF569Q5MCW4 686 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 ALS2CLQ60I27 953 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
PTPN7-207ENST00000468385 CRTC3Q6UUV7 619 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 CLEC17AQ6ZS10 378 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-207ENST00000468385 TRIM48Q8IWZ4 208 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 GPR26Q8NDV2 337 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 CT55Q8WUE5 264 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 SPATA16Q9BXB7 569 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 TRIM55Q9BYV6 548 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 TWSG1Q9GZX9 223 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 BRD8Q9H0E9 1235 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 LHX9Q9NQ69 397 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 POT1Q9NUX5 634 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 HAUS2Q9NVX0 235 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 LNPEPQ9UIQ6 1025 aa12.87□□□□□ -0.35
PTPN7-207ENST00000468385 PADI1Q9ULC6 663 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms