RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CAAP1	Q9H8G2	361 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	MAGEE1	Q9HCI5	957 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	DNAJC28	Q9NX36	388 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	SYBU	Q9NX95	663 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	NLGN3	Q9NZ94	848 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	VPS18	Q9P253	973 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	RABGEF1	Q9UJ41	708 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	ZNF180	Q9UJW8	692 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	PHTF1	Q9UMS5	762 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	PPIL1	Q9Y3C6	166 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	TCAF1	Q9Y4C2	921 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	IKBKG	Q9Y6K9	419 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	CSNK1G3	Q9Y6M4	447 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	RPS6KL1	Q9Y6S9	549 aa		12	□□□□□ -0.49
CTNS-205	ENST00000467663	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12	□□□□□ -0.49
CTNS-205	ENST00000467663	TCRBV9S1A1T	A0A576	114 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	FAM149A	A5PLN7	773 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	TRABD2B	A6NFA1	517 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	MROH6	A6NGR9	719 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	C2orf81	A6NN90	581 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663		F5H423	210 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663		H3BM21	787 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	AGPS	O00116	658 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	TRAFD1	O14545	582 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	ALPPL2	P10696	532 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	CKMT1A	P12532	417 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	PSMA3	P25788	255 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	SERPINB9	P50453	376 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	EPHB1	P54762	984 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	ZNF844	Q08AG5	666 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	MGAT5	Q09328	741 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	EIF2B5	Q13144	721 aa	Known RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	MSLN	Q13421	630 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	PTK2B	Q14289	1009 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	CRYM	Q14894	314 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	AGER	Q15109	404 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	TAF1A	Q15573	450 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	KRT71	Q3SY84	523 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	CERCAM	Q5T4B2	595 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	PDPK2P	Q6A1A2	396 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	ERAP2	Q6P179	960 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	KDM7A	Q6ZMT4	941 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	TAOK1	Q7L7X3	1001 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	LRRC6	Q86X45	466 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	ZSWIM9	Q86XI8	627 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	CACTIN-AS1	Q8N1I8	211 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	AGGF1	Q8N302	714 aa	eCLIP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	FAM181A	Q8N9Y4	354 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	FBF1	Q8TES7	1133 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	LYSMD1	Q96S90	227 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	WDR83	Q9BRX9	315 aa	Known RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	PCDH12	Q9NPG4	1184 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	MBNL1	Q9NR56	388 aa	Known RBP	11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	SENP1	Q9P0U3	644 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	KLF15	Q9UIH9	416 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	CHKB	Q9Y259	395 aa		11.99	□□□□□ -0.49
CTNS-205	ENST00000467663	MYLK	Q15746	1914 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	FAM159B	A6NKW6	160 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663		K7ESM1	405 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	FFAR2	O15552	330 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	PRL	P01236	227 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	JUP	P14923	745 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	JUND	P17535	347 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	HNF1B	P35680	557 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	MMP12	P39900	470 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	HADHA	P40939	763 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	MSH2	P43246	934 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	THOP1	P52888	689 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	E2F1	Q01094	437 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	ACVR1	Q04771	509 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	TRAF2	Q12933	501 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	LONRF1	Q17RB8	773 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	TSTD2	Q5T7W7	516 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	ZDHHC20	Q5W0Z9	365 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	ADGRD1	Q6QNK2	874 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	SLC26A11	Q86WA9	606 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	IGDCC3	Q8IVU1	814 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	MPP5	Q8N3R9	675 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	MDM1	Q8TC05	714 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	BTN2A2	Q8WVV5	523 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	ZNF669	Q96BR6	464 aa	Predicted RBP	11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	CERS2	Q96G23	380 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	CFAP36	Q96G28	342 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	SGSM3	Q96HU1	749 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	TBATA	Q96M53	351 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	NSMCE3	Q96MG7	304 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	APOL2	Q9BQE5	337 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	DUSP23	Q9BVJ7	150 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	TMBIM4	Q9HC24	238 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	TREX1	Q9NSU2	369 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	FAM53C	Q9NYF3	392 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	LGALS13	Q9UHV8	139 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	PCDHGC4	Q9Y5F7	938 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	SPEG	Q15772	3267 aa		11.98	□□□□□ -0.49
CTNS-205	ENST00000467663	ASPM	Q8IZT6	3477 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms