RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 KRTCAP3Q53RY4 240 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 SIRPB2Q5JXA9 342 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 EEF1A1P5Q5VTE0 462 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 FAM180BQ6P0A1 224 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 ZNF449Q6P9G9 518 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 ZNF852Q6ZMS4 543 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 IKBIPQ70UQ0 350 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 TRMT1LQ7Z2T5 733 aaKnown RBP4.03□□□□□ -1.76
SMC4-207ENST00000467263 ADSSL1Q8N142 457 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 OR52I2Q8NH67 350 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 UTP15Q8TED0 518 aaKnown RBP4.03□□□□□ -1.76
SMC4-207ENST00000467263 SGCDQ92629 289 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 HDAC2Q92769 488 aaKnown RBP4.03□□□□□ -1.76
SMC4-207ENST00000467263 LINGO1Q96FE5 620 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 ELMOD3Q96FG2 381 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 EGLN2Q96KS0 407 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 SEPT5Q99719 369 aaPredicted RBP4.03□□□□□ -1.76
SMC4-207ENST00000467263 NEURL2Q9BR09 285 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 ITPAQ9BY32 194 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 LRMDAQ9H2I8 198 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 MUC13Q9H3R2 512 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 MTMR10Q9NXD2 777 aa4.03□□□□□ -1.76
SMC4-207ENST00000467263 TDRD9Q8NDG6 1382 aaKnown RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 A0A087X0M5 115 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 A0A1B0GX30 115 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 KANSL1LA0AUZ9 987 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 FAM172BPA6NC97 362 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 EIF3DO15371 548 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMC4-207ENST00000467263 FAM106CPP0CH98 169 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 ANXA7P20073 488 aaKnown RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 MAPK4P31152 587 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 ARL3P36405 182 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 PLIN5Q00G26 463 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 SETQ01105 290 aaPredicted RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 PDSS1Q5T2R2 415 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 CCDC30Q5VVM6 783 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 LCN10Q6JVE6 187 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 MARK2Q7KZI7 788 aaKnown RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 RSRC2Q7L4I2 434 aaKnown RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 ATG9AQ7Z3C6 839 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 RNF168Q8IYW5 571 aaPredicted RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 RASGEF1CQ8N431 466 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 METTL27Q8N6F8 245 aaPredicted RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 ANKRD52Q8NB46 1076 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 HJURPQ8NCD3 748 aaPredicted RBP4.02□□□□□ -1.77
SMC4-207ENST00000467263 DNAAF4Q8WXU2 420 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 ALG14Q96F25 216 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 SEMA3CQ99985 751 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 LRRC1Q9BTT6 524 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 SETD4Q9NVD3 440 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 FBXW11Q9UKB1 542 aa4.02□□□□□ -1.77
SMC4-207ENST00000467263 RUSC2Q8N2Y8 1516 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 ZCWPW2A0A1B0GU75 182 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 A0A1W2PP11 408 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 PGPEP1LA6NFU8 196 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 TMEM178BH3BS89 294 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 PLPP2O43688 288 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 USO1O60763 962 aaKnown RBP4.01□□□□□ -1.77
SMC4-207ENST00000467263 SLC22A3O75751 556 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 LAMP2P13473 410 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 SREBF2Q12772 1141 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 EIF4A2Q14240 407 aaKnown RBP4.01□□□□□ -1.77
SMC4-207ENST00000467263 KLHL35Q6PF15 583 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 C19orf48Q6RUI8 117 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 ZNF704Q6ZNC4 412 aaPredicted RBP4.01□□□□□ -1.77
SMC4-207ENST00000467263 CLEC17AQ6ZS10 378 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 CCDC190Q86UF4 302 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 NFE4Q86UQ8 179 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 NGEFQ8N5V2 710 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 TEX19Q8NA77 164 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 CMTM3Q96MX0 182 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 GAD1Q99259 594 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 NAP1L4Q99733 375 aaKnown RBP4.01□□□□□ -1.77
SMC4-207ENST00000467263 FTOQ9C0B1 505 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMC4-207ENST00000467263 SIL1Q9H173 461 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 MAGIXQ9H6Y5 334 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 FKRPQ9H9S5 495 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 EPB41L5Q9HCM4 733 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 ZNF334Q9HCZ1 680 aaPredicted RBP4.01□□□□□ -1.77
SMC4-207ENST00000467263 MARCH4Q9P2E8 410 aaPredicted RBP4.01□□□□□ -1.77
SMC4-207ENST00000467263 KLHL9Q9P2J3 617 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 MTMR6Q9Y217 621 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 B3GALT5Q9Y2C3 310 aa4.01□□□□□ -1.77
SMC4-207ENST00000467263 ARHGEF40Q8TER5 1519 aa4□□□□□ -1.77
SMC4-207ENST00000467263 CTAGE9A4FU28 777 aa4□□□□□ -1.77
SMC4-207ENST00000467263 PI4KAP2A4QPH2 592 aa4□□□□□ -1.77
SMC4-207ENST00000467263 OR5K3A6NET4 321 aa4□□□□□ -1.77
SMC4-207ENST00000467263 DDX58O95786 925 aaKnown RBP4□□□□□ -1.77
SMC4-207ENST00000467263 CTAGE8P0CG41 777 aa4□□□□□ -1.77
SMC4-207ENST00000467263 CDH2P19022 906 aaPredicted RBP4□□□□□ -1.77
SMC4-207ENST00000467263 TERF1P54274 439 aa4□□□□□ -1.77
SMC4-207ENST00000467263 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
SMC4-207ENST00000467263 DCAF7P61962 342 aa4□□□□□ -1.77
SMC4-207ENST00000467263 TFAP4Q01664 338 aa4□□□□□ -1.77
SMC4-207ENST00000467263 LRMPQ12912 555 aa4□□□□□ -1.77
SMC4-207ENST00000467263 DMP1Q13316 513 aaPredicted RBP4□□□□□ -1.77
SMC4-207ENST00000467263 MAMLD1Q13495 774 aa4□□□□□ -1.77
SMC4-207ENST00000467263 SOWAHCQ53LP3 525 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms