RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 THRSPQ92748 146 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 MUL1Q969V5 352 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 ERO1AQ96HE7 468 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 METTL2AQ96IZ6 378 aaKnown RBP5.7□□□□□ -1.5
LRCH3-212ENST00000466845 NEU1Q99519 415 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 RBM4BQ9BQ04 359 aaKnown RBP5.7□□□□□ -1.5
LRCH3-212ENST00000466845 RBM4Q9BWF3 364 aaKnown RBP5.7□□□□□ -1.5
LRCH3-212ENST00000466845 COLEC11Q9BWP8 271 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 APOL6Q9BWW8 343 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 NUF2Q9BZD4 464 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 USP44Q9H0E7 712 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 RNPEPQ9H4A4 650 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 IL26Q9NPH9 171 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 GJB4Q9NTQ9 266 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 CYP39A1Q9NYL5 469 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 ING1Q9UK53 422 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-212ENST00000466845 TMCO1Q9UM00 188 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 CDY2AQ9Y6F7 541 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 SPACA6W5XKT8 324 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 TECPR2O15040 1411 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 YTHDC2Q9H6S0 1430 aaKnown RBP5.7□□□□□ -1.5
LRCH3-212ENST00000466845 NPHP3Q7Z494 1330 aa5.7□□□□□ -1.5
LRCH3-212ENST00000466845 KIF1AQ12756 1690 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 PNPLA6Q8IY17 1366 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 A0A1W2PPC4 97 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SYCE3A1L190 88 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SNTNA6NMZ2 147 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 B5MCH6 92 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 E9PI62 339 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 MED7O43513 233 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 RHBDL1O75783 438 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 HEXIM1O94992 359 aaKnown RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 AKR7A3O95154 331 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SPDEFO95238 335 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 CSF2P04141 144 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 MYBL1P10243 752 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 GPTP24298 496 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SLC7A1P30825 629 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 GRK5P34947 590 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 ARL3P36405 182 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 CASRP41180 1078 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 GABRB2P47870 512 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 ALDH1A3P47895 512 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 KCNJ5P48544 419 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 AARSP49588 968 aaKnown RBP eCLIP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 PSMC5P62195 406 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 XIAPP98170 497 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SLC12A1Q13621 1099 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 GLE1Q53GS7 698 aaKnown RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 ZNF628Q5EBL2 1059 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 LY6G5CQ5SRR4 150 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SPECC1LQ69YQ0 1117 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 KIAA1161Q6NSJ0 714 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 BLOC1S2Q6QNY1 142 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 FAM83HQ6ZRV2 1179 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 LINC00696Q6ZRV3 163 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 H1FNTQ75WM6 255 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 CCDC25Q86WR0 208 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 LYSMD2Q8IV50 215 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 DDIASQ8IXT1 998 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SRRM1Q8IYB3 904 aaKnown RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 EIF1ADQ8N9N8 165 aaKnown RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 NEK11Q8NG66 645 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 OR52N2Q8NGI0 321 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 AKR7LQ8NHP1 331 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 LMBR1Q8WVP7 490 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 AZIN2Q96A70 460 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 RMDN1Q96DB5 314 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 RNF125Q96EQ8 232 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 HEPHQ9BQS7 1158 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 CCM2Q9BSQ5 444 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 MTG1Q9BT17 334 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 TEX12Q9BXU0 123 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 THAP2Q9H0W7 228 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 ZSCAN16Q9H4T2 348 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 PALMDQ9NP74 551 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 SLC2A4RGQ9NR83 387 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 FAM120CQ9NX05 1096 aaKnown RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 MRPL39Q9NYK5 338 aaKnown RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 RCOR3Q9P2K3 495 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 COPG2Q9UBF2 871 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 DBF4Q9UBU7 674 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 RGS17Q9UGC6 210 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-212ENST00000466845 ATP6V1HQ9UI12 483 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 PCDHA7Q9UN72 937 aa5.69□□□□□ -1.5
LRCH3-212ENST00000466845 CPDO75976 1380 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 ABCC11Q96J66 1382 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 FMN2Q9NZ56 1722 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 A0A087X1B8 175 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 A0A0U1RQV5 110 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 A0A1W2PQ67 120 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 GAGE12BA1L429 117 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 MACROD2A1Z1Q3 448 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 FAM234BA2RU67 622 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 GAGE12HA6NDE8 117 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 TMEM210A6NLX4 147 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 ZNF716A6NP11 495 aa5.68□□□□□ -1.5
LRCH3-212ENST00000466845 A8MV72 311 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms