RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 OR2C1O95371 312 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 FAM106CPP0CH98 169 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 GAGE5Q13069 117 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 GAGE6Q13070 117 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 NSUN5P2Q63ZY6 315 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 CFAP77Q6ZQR2 320 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 PLEKHM3Q6ZWE6 761 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 ZNF771Q7L3S4 317 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-205ENST00000464541 MAP7D3Q8IWC1 876 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 ADGRF2Q8IZF7 708 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 WDTC1Q8N5D0 677 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 SLC38A9Q8NBW4 561 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 BBS10Q8TAM1 723 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 NUDCD1Q96RS6 583 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 SEPT11Q9NVA2 429 aaKnown RBP5.75□□□□□ -1.49
PTCD3-205ENST00000464541 RALYQ9UKM9 306 aaKnown RBP5.75□□□□□ -1.49
PTCD3-205ENST00000464541 OR2W1Q9Y3N9 320 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 SCN5AQ14524 2016 aa5.75□□□□□ -1.49
PTCD3-205ENST00000464541 A0A1W2PP11 408 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 TMCC2O75069 709 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 CETPP11597 493 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 PSMB10P40306 273 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 MMP14P50281 582 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 GPR143P51810 404 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 CDH8P55286 799 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 CDC16Q13042 620 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 MAPRE1Q15691 268 aaKnown RBP5.74□□□□□ -1.49
PTCD3-205ENST00000464541 HYIQ5T013 277 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 RARS2Q5T160 578 aaKnown RBP5.74□□□□□ -1.49
PTCD3-205ENST00000464541 GDPD4Q6W3E5 623 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 PM20D2Q8IYS1 436 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 LMNTD1Q8N9Z9 388 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 SLC38A5Q8WUX1 472 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 TMEM255BQ8WV15 326 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 ZKSCAN4Q969J2 545 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-205ENST00000464541 ELMOD3Q96FG2 381 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 PCYT2Q99447 389 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 CHCHD6Q9BRQ6 235 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 SYNCQ9H7C4 482 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 SETD4Q9NVD3 440 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 TRMT1Q9NXH9 659 aaKnown RBP5.74□□□□□ -1.49
PTCD3-205ENST00000464541 POLG2Q9UHN1 485 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 ARHGEF40Q8TER5 1519 aa5.74□□□□□ -1.49
PTCD3-205ENST00000464541 ZCWPW2A0A1B0GU75 182 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 ANKRD66B4E2M5 251 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 C16orf97H3BN30 126 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 MT3P25713 68 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 MAPK4P31152 587 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 HOXA1P49639 335 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 CAMPP49913 170 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 CLNS1AP54105 237 aaKnown RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 EIF5P55010 431 aaKnown RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 PLIN5Q00G26 463 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 SIM2Q14190 667 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 CHST9Q7L1S5 443 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 NFE4Q86UQ8 179 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 TMPRSS12Q86WS5 348 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 RPAP2Q8IXW5 612 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 TTC39CQ8N584 583 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 GCSAMQ8N6F7 178 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 EMC1Q8N766 993 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 HJURPQ8NCD3 748 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 HMGCLL1Q8TB92 370 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 UTP15Q8TED0 518 aaKnown RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 INPP4AQ96PE3 977 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-205ENST00000464541 LRRC4Q9HBW1 653 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 TBC1D22BQ9NU19 505 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 OGFRQ9NZT2 677 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 NENFQ9UMX5 172 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 TAF1P21675 1872 aa5.73□□□□□ -1.49
PTCD3-205ENST00000464541 FAM172BPA6NC97 362 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 RB1P06400 928 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 GABRB1P18505 474 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 ANXA7P20073 488 aaKnown RBP5.72□□□□□ -1.49
PTCD3-205ENST00000464541 KCNA5P22460 613 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 FMO5P49326 533 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 CTSCP53634 463 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 ISL1P61371 349 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 ARL16Q0P5N6 197 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 MVPQ14764 893 aaKnown RBP5.72□□□□□ -1.49
PTCD3-205ENST00000464541 CCDC96Q2M329 555 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 TPRG1Q6ZUI0 275 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 DSG4Q86SJ6 1040 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 CCDC190Q86UF4 302 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 MCEMP1Q8IX19 187 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 PPP4R1Q8TF05 950 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 DNASE2BQ8WZ79 361 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 DACH2Q96NX9 599 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 SEMA3CQ99985 751 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 PLK3Q9H4B4 646 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 TCP11L1Q9NUJ3 509 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 FBXL17Q9UF56 701 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 DBNLQ9UJU6 430 aaKnown RBP5.72□□□□□ -1.49
PTCD3-205ENST00000464541 ZNF711Q9Y462 761 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 CMAHPQ9Y471 501 aa5.72□□□□□ -1.49
PTCD3-205ENST00000464541 CTAGE9A4FU28 777 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 OR5K3A6NET4 321 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 KRT86O43790 486 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
PTCD3-205ENST00000464541 ATP1A1P05023 1023 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms