RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 PDZD3Q86UT5 571 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 MARCH9Q86YJ5 346 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 PLXDC1Q8IUK5 500 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 ZSCAN1Q8NBB4 408 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 CCL4L1Q8NHW4 92 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 TEFMQ96QE5 360 aaKnown RBP13.29□□□□□ -0.28
COMMD3-205ENST00000463688 UBL7Q96S82 380 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-205ENST00000463688 ZPBPQ9BS86 351 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 OR2AG1Q9H205 316 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 UBP1Q9NZI7 540 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 CNOT6Q9ULM6 557 aaKnown RBP13.29□□□□□ -0.28
COMMD3-205ENST00000463688 PTPRBP23467 1997 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 ASPMQ8IZT6 3477 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 A0A1W2PQM1 296 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 GRID2IPA4D2P6 1211 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 CDRT15L2A8MXV6 281 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 CHUKO15111 745 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 VIPP01282 170 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 SLC4A1P02730 911 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ATP1A1P05023 1023 aaKnown RBP13.28□□□□□ -0.28
COMMD3-205ENST00000463688 GSTM1P09488 218 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 CCDC175P0C221 793 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ACP5P13686 325 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 AK4P27144 223 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-205ENST00000463688 CD68P34810 354 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-205ENST00000463688 B4GALNT1Q00973 533 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 GSTM4Q03013 218 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 COL28A1Q2UY09 1125 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 AMZ1Q400G9 498 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 AGAP9Q5VTM2 703 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 TMEM71Q6P5X7 295 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ZNF662Q6ZS27 426 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 NAGSQ8N159 534 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 PELI3Q8N2H9 469 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 SPC24Q8NBT2 197 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 GPR26Q8NDV2 337 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 LRRN4Q8WUT4 740 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ZFPM2Q8WW38 1151 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 DCUN1D1Q96GG9 259 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 MRGPRX2Q96LB1 330 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 AGAP2Q99490 1192 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 GOLPH3Q9H4A6 298 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 LRRC40Q9H9A6 602 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ASCL3Q9NQ33 180 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 POT1Q9NUX5 634 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 SMOXQ9NWM0 555 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 IL17CQ9P0M4 197 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ATXN10Q9UBB4 475 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 ZKSCAN5Q9Y2L8 839 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 LOXL2Q9Y4K0 774 aa13.28□□□□□ -0.28
COMMD3-205ENST00000463688 LILRA5A6NI73 299 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 FADS2P1A8MWK0 482 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 TOX3O15405 576 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-205ENST00000463688 KLK10O43240 276 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 ZNF7P17097 686 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-205ENST00000463688 MSH3P20585 1137 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 MSNP26038 577 aaKnown RBP13.27□□□□□ -0.29
COMMD3-205ENST00000463688 UGT1A5P35504 534 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 PPARGP37231 505 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-205ENST00000463688 LIMK2P53671 638 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 MAZP56270 477 aaKnown RBP13.27□□□□□ -0.29
COMMD3-205ENST00000463688 CLDN6P56747 220 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 RHDQ02161 417 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 CCDC173Q0VFZ6 552 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 TMEM115Q12893 351 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-205ENST00000463688 IHHQ14623 411 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 GPR33Q49SQ1 333 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 FOXR1Q6PIV2 292 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 RANBP10Q6VN20 620 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 RFLNAQ6ZTI6 216 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 AMZ2Q86W34 360 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 JAMLQ86YT9 394 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 TRAPPC5Q8IUR0 188 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 SLC25A41Q8N5S1 370 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 ACRBPQ8NEB7 543 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 WBP1Q96G27 269 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 HES6Q96HZ4 224 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 OSGEPL1Q9H4B0 414 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 ARNT2Q9HBZ2 717 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 IL26Q9NPH9 171 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 KLC4Q9NSK0 619 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 ACSL5Q9ULC5 683 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.29
COMMD3-205ENST00000463688 TP53BP1Q12888 1972 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-205ENST00000463688 IGHV1OR21-1A0A087WYE8 117 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 PDZK1P1A8MUH7 402 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 B4E171 279 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 QSOX1O00391 747 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 FUCA1P04066 466 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 PIRTP0C851 137 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 ZNF8P17098 575 aaPredicted RBP13.26□□□□□ -0.29
COMMD3-205ENST00000463688 XRCC1P18887 633 aaPredicted RBP13.26□□□□□ -0.29
COMMD3-205ENST00000463688 ITGALP20701 1170 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 NDUFS1P28331 727 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 CD1CP29017 333 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 TSPAN7P41732 249 aa13.26□□□□□ -0.29
COMMD3-205ENST00000463688 MARCKSL1P49006 195 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms