RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 SRFBP1Q8NEF9 429 aaKnown RBP12.73□□□□□ -0.37
NUP58-206ENST00000463407 ALKBH4Q9NXW9 302 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 ABI3Q9P2A4 366 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 INSL5Q9Y5Q6 135 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 SOD2P04179 222 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 CSF2RAP15509 400 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 CRHR1P34998 444 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 SMIM11AP58511 58 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 HNRNPDQ14103 355 aaKnown RBP12.73□□□□□ -0.37
NUP58-206ENST00000463407 INO80DQ53TQ3 878 aaPredicted RBP12.73□□□□□ -0.37
NUP58-206ENST00000463407 TRABD2AQ86V40 505 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 UNC5BQ8IZJ1 945 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 BRSK1Q8TDC3 778 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 SLC44A1Q8WWI5 657 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 WDR26Q9H7D7 661 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 NUDT4Q9NZJ9 180 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 FBXW2Q9UKT8 454 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 TRAF6Q9Y4K3 522 aa12.73□□□□□ -0.37
NUP58-206ENST00000463407 NRXN3Q9Y4C0 1643 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 STK16O75716 305 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 CLDN9O95484 217 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SLC6A2P23975 617 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 NMBRP28336 390 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SPIBQ01892 262 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SYPL2Q5VXT5 272 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 NXNL1Q96CM4 212 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 APOLD1Q96LR9 279 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 CARS2Q9HA77 564 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 MIOSQ9NXC5 875 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 ARL5AQ9Y689 179 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 CHD2O14647 1828 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 HTRA3P83110 453 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 C2orf80Q0P641 193 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SH3PXD2AQ5TCZ1 1133 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 PRSS58Q8IYP2 241 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 OR8H2Q8N162 312 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 GMLQ99445 158 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SUV39H2Q9H5I1 410 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SMG9Q9H0W8 520 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 EDDM13A0A1B0GTR0 161 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 PTGES3LE9PB15 166 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 WNT9AO14904 365 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 DHX15O43143 795 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 ALDH4A1P30038 563 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 NEDD8Q15843 81 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 NRF1Q16656 503 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 AAK1Q2M2I8 961 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 TRIM71Q2Q1W2 868 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 APLFQ8IW19 511 aaPredicted RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 OFCC1Q8IZS5 231 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 FBXO15Q8NCQ5 510 aaPredicted RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 PHF10Q8WUB8 498 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 EXOSC8Q96B26 276 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 PTPN18Q99952 460 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 KXD1Q9BQD3 176 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 BCO2Q9BYV7 579 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 SLC22A3O75751 556 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 PIGRP01833 764 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 BPGMP07738 259 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 BMP7P18075 431 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 HSPA7P48741 367 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 TNK2Q07912 1038 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 NR1D2Q14995 579 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 ARMCX4Q5H9R4 360 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 DDHD1Q8NEL9 900 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 HDHD2Q9H0R4 259 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 NOL11Q9H8H0 719 aaKnown RBP12.72□□□□□ -0.37
NUP58-206ENST00000463407 LRTM1Q9HBL6 345 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 ZNF446Q9NWS9 450 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 PACSIN3Q9UKS6 424 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 MYRFQ9Y2G1 1151 aa12.72□□□□□ -0.37
NUP58-206ENST00000463407 TRIM38O00635 465 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 TRAFD1O14545 582 aaPredicted RBP12.71□□□□□ -0.37
NUP58-206ENST00000463407 CDC42P60953 191 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 AMZ2Q86W34 360 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 ZNF366Q8N895 744 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.37
NUP58-206ENST00000463407 CYP2S1Q96SQ9 504 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 SIX2Q9NPC8 291 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 IL23AQ9NPF7 189 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
NUP58-206ENST00000463407 CA9Q16790 459 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 MAGEE2Q8TD90 523 aaPredicted RBP12.71□□□□□ -0.37
NUP58-206ENST00000463407 TSSK3Q96PN8 268 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 SH3GL3Q99963 347 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 ACTR1BP42025 376 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 ACTR1AP61163 376 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 BNC1Q01954 994 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 GTF2H2Q13888 395 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 ANKRD22Q5VYY1 191 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 GTF2H2CQ6P1K8 395 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 TMEM139Q8IV31 216 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 SLC9A6Q92581 669 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms