RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SLC17A4Q9Y2C5 497 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PCDHGA8Q9Y5G5 932 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ENTPD2Q9Y5L3 495 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ZFHX4Q86UP3 3567 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PKD1L2Q7Z442 2459 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CHD6Q8TD26 2715 aa13.12□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ZZEF1O43149 2961 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CCDC187A0A096LP49 1063 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SUN1O94901 812 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SLC25A14O95258 325 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SOD1P00441 154 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CEACAM5P06731 702 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 IVLP07476 585 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 APRTP07741 180 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PNLIPP16233 465 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ITPKBP27987 946 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ETF1P62495 437 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 BASP1P80723 227 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SARNPP82979 210 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 EIF3IQ13347 325 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 OLIG2Q13516 323 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ITGA9Q13797 1035 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 IGF2-ASQ6U949 168 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PRUNE1Q86TP1 453 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 KCNE4Q8WWG9 221 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 COX14Q96I36 57 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 RUNDC3BQ96NL0 473 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 AGAP2Q99490 1192 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FRMD8Q9BZ67 464 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 DPH1Q9BZG8 443 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TMEM168Q9H0V1 697 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 LRRN3Q9H3W5 708 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 RMI1Q9H9A7 625 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FGF22Q9HCT0 170 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 EIF2B3Q9NR50 452 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TRNAU1APQ9NX07 287 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 APPL1Q9UKG1 709 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ARL5AQ9Y689 179 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 APC2O95996 2303 aa13.11□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GLYATL1P3A0A0U1RQE8 302 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 B4DGG1 531 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 NTN3O00634 580 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 RPLP0P05388 317 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TPH1P17752 444 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GNPDA1P46926 289 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 INHBCP55103 352 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CCL7P80098 99 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GPS1Q13098 491 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 MSLNQ13421 630 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SKIDA1Q1XH10 827 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 C14orf28Q4W4Y0 310 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TTC27Q6P3X3 843 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 OGFOD3Q6PK18 319 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 DOK6Q6PKX4 331 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 PHYKPLQ8IUZ5 450 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CCNJLQ8IV13 435 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 C17orf53Q8N3J3 647 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 Q8N9G6 341 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GLIS1Q8NBF1 620 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GPR156Q8NFN8 814 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 OR4K2Q8NGD2 314 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 OR52K1Q8NGK4 314 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GDAP1Q8TB36 358 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GLYATL1Q969I3 302 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SCARF2Q96GP6 870 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SLC46A1Q96NT5 459 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FCRL3Q96P31 734 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SUDS3Q9H7L9 328 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TRIM39Q9HCM9 518 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 IL26Q9NPH9 171 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SMARCAL1Q9NZC9 954 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 AKAP7Q9P0M2 348 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 VPS18Q9P253 973 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 LRIT1Q9P2V4 623 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CNOT6Q9ULM6 557 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SUFUQ9UMX1 484 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TMEM98Q9Y2Y6 226 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SCN8AQ9UQD0 1980 aa13.1□□□□□ -0.31
RAB11FIP3-207ENST00000461009 LRP4O75096 1905 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 RHPN2P1A8MT19 583 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 FADS2P1A8MWK0 482 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GPR89AB7ZAQ6 455 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 CCDC188H7C350 402 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TNFSF15O95150 251 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 ECEL1O95672 775 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TUBB4AP04350 444 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 GPR89BP0CG08 455 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 NPY2RP49146 381 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 TMPRSS3P57727 454 aa13.09□□□□□ -0.31
RAB11FIP3-207ENST00000461009 SEPT6Q14141 434 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms