RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 E9PQ18 207 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 TNPO2O14787 897 aaKnown RBP2.39□□□□□ -2.03
SYPL1-203ENST00000460770 CD48P09326 243 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 FAM157CP0CG43 387 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 CEACAM1P13688 526 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 MSH3P20585 1137 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 UGT1A1P22309 533 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 CLDN20P56880 219 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 SNRPD1P62314 119 aaKnown RBP2.39□□□□□ -2.03
SYPL1-203ENST00000460770 BIRC2Q13490 618 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 KIR2DS5Q14953 304 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 DUOXA1Q1HG43 343 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 KRTCAP3Q53RY4 240 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 SUSD1Q6UWL2 747 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 RAD9BQ6WBX8 426 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 DPPA4Q7L190 304 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 HAPLN4Q86UW8 402 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 OR2T6Q8NHC8 308 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 UTP15Q8TED0 518 aaKnown RBP2.39□□□□□ -2.03
SYPL1-203ENST00000460770 TBC1D20Q96BZ9 403 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 GMPPAQ96IJ6 420 aaPredicted RBP2.39□□□□□ -2.03
SYPL1-203ENST00000460770 KLHL15Q96M94 604 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 TMEM68Q96MH6 324 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 CABLES2Q9BTV7 478 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 CDK19Q9BWU1 502 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 TKTL2Q9H0I9 626 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 SEBOXQ9HB31 216 aaPredicted RBP2.39□□□□□ -2.03
SYPL1-203ENST00000460770 APOBEC3GQ9HC16 384 aaKnown RBP2.39□□□□□ -2.03
SYPL1-203ENST00000460770 ASAH2Q9NR71 780 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 SLC38A7Q9NVC3 462 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 CACNG5Q9UF02 275 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 HAO1Q9UJM8 370 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 HSF4Q9ULV5 492 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 ZHX2Q9Y6X8 837 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 STK36Q9NRP7 1315 aa2.39□□□□□ -2.03
SYPL1-203ENST00000460770 TP53BP1Q12888 1972 aaPredicted RBP2.38□□□□□ -2.03
SYPL1-203ENST00000460770 FAM90A26D6RGX4 464 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 M0QZ24 198 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 TSHBP01222 138 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 HMBSP08397 361 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 ZNF182P17025 639 aaPredicted RBP2.38□□□□□ -2.03
SYPL1-203ENST00000460770 MBTD1Q05BQ5 628 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 NEXNQ0ZGT2 675 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 RIGQ13278 110 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 TDGQ13569 410 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 PDE1CQ14123 709 aaPredicted RBP2.38□□□□□ -2.03
SYPL1-203ENST00000460770 GPR68Q15743 365 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 FASTKD5Q7L8L6 764 aaKnown RBP2.38□□□□□ -2.03
SYPL1-203ENST00000460770 NRROSQ86YC3 692 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 ANKRD18AQ8IVF6 992 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 NGEFQ8N5V2 710 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 ZNF614Q8N883 585 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 AMER3Q8N944 861 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 HMGCLL1Q8TB92 370 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 RHBDF1Q96CC6 855 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 SAAL1Q96ER3 474 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 OXNAD1Q96HP4 312 aaPredicted RBP2.38□□□□□ -2.03
SYPL1-203ENST00000460770 PRMT6Q96LA8 375 aaPredicted RBP2.38□□□□□ -2.03
SYPL1-203ENST00000460770 RPS6KC1Q96S38 1066 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 IWS1Q96ST2 819 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 SYT11Q9BT88 431 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 ISCA1Q9BUE6 129 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 RIC8AQ9NPQ8 531 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 ITM2CQ9NQX7 267 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 ATAD3AQ9NVI7 634 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 KCND2Q9NZV8 630 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 STK39Q9UEW8 545 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 PADI3Q9ULW8 664 aa2.38□□□□□ -2.03
SYPL1-203ENST00000460770 IGLV7-46A0A075B6I9 117 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 CCDC196A0A1B0GTZ2 297 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 EIF4E1BA6NMX2 242 aaKnown RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 EIF3CLB5ME19 914 aaKnown RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 TMEM178BH3BS89 294 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 EIF3JO75822 258 aaKnown RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 TFAP2AP05549 437 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 LIFP15018 202 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 NFKBIAP25963 317 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 ABCD1P33897 745 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 CPOXP36551 454 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 APOBEC1P41238 236 aaKnown RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 CTCFP49711 727 aaPredicted RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 CTSCP53634 463 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 EIF3BP55884 814 aaKnown RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 VAMP2P63027 116 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 ZBED6P86452 979 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 SPOCK1Q08629 439 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 OLIG2Q13516 323 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 FGFBP1Q14512 234 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 FFAR4Q5NUL3 377 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 ZNF613Q6PF04 617 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 MFSD6Q6ZSS7 791 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 ERC1Q8IUD2 1116 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 SMC5Q8IY18 1101 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 ZNF611Q8N823 705 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 ZNRF4Q8WWF5 429 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 SLC44A1Q8WWI5 657 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 PABPC5Q96DU9 382 aaKnown RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 RRNAD1Q96FB5 475 aaKnown RBP2.37□□□□□ -2.03
SYPL1-203ENST00000460770 RHNO1Q9BSD3 238 aa2.37□□□□□ -2.03
SYPL1-203ENST00000460770 FUZQ9BT04 418 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms