RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 GFI1Q99684 422 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 HIPK2Q9H2X6 1198 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 WNT16Q9UBV4 365 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 DNAJB4Q9UDY4 337 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 CHORDC1Q9UHD1 332 aaPredicted RBP3.36□□□□□ -1.87
RFC4-211ENST00000460408 PLAGL1Q9UM63 463 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 PTRH2Q9Y3E5 179 aaKnown RBP3.36□□□□□ -1.87
RFC4-211ENST00000460408 RPS6KL1Q9Y6S9 549 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 NESP48681 1621 aa3.36□□□□□ -1.87
RFC4-211ENST00000460408 LOC102723996A0A087X1L8 192 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 A0A1W2PP11 408 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 EIF4E1BA6NMX2 242 aaKnown RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 ERVV-2B6SEH9 535 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 ANKRD28O15084 1053 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 MID1O15344 667 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 PLPP2O43688 288 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 PLOD3O60568 738 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 GPC4O75487 556 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 KDM4BO94953 1096 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 CLDN14O95500 239 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 HSP90AA1P07900 732 aaKnown RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 LINC00271P0C7V0 271 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 PRLRP16471 622 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 CLDN20P56880 219 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 KIF5AQ12840 1032 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 GRSF1Q12849 480 aaKnown RBP eCLIP3.35□□□□□ -1.87
RFC4-211ENST00000460408 ZNF155Q12901 538 aaPredicted RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 MYBPHQ13203 477 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 KCNC3Q14003 757 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 BAATQ14032 418 aaPredicted RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 MVPQ14764 893 aaKnown RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 PLCB4Q15147 1175 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 DLG2Q15700 870 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 SYT16Q17RD7 645 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 MYLK3Q32MK0 819 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 KRTCAP3Q53RY4 240 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 RAB6CQ53S08 254 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 KCNT1Q5JUK3 1230 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 C18orf63Q68DL7 685 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 USP43Q70EL4 1123 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 ARID3BQ8IVW6 561 aaPredicted RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 CEP97Q8IW35 865 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 ZNF34Q8IZ26 560 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 C1orf87Q8N0U7 546 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 RASGEF1CQ8N431 466 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 ACVR1CQ8NER5 493 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 HMGCLL1Q8TB92 370 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 MAGEC3Q8TD91 643 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 TMED6Q8WW62 240 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 ZNF479Q96JC4 524 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 NUDCD1Q96RS6 583 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 ABHD1Q96SE0 405 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 PCYT2Q99447 389 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 PAFAH2Q99487 392 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 CMKLR1Q99788 373 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 SLF1Q9BQI6 1058 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 NTPCRQ9BSD7 190 aaKnown RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 TMEM39BQ9GZU3 492 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 RAB6CQ9H0N0 254 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 SIL1Q9H173 461 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 PPIL3Q9H2H8 161 aaKnown RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 GAREM1Q9H706 876 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 OCIAD1Q9NX40 245 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 MRPL15Q9P015 296 aaKnown RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 MARCH4Q9P2E8 410 aaPredicted RBP3.35□□□□□ -1.87
RFC4-211ENST00000460408 MORF4L1Q9UBU8 362 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 PROCRQ9UNN8 238 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 LOXL2Q9Y4K0 774 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 SNX9Q9Y5X1 595 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 ARAP1Q96P48 1450 aa3.35□□□□□ -1.87
RFC4-211ENST00000460408 HECW2Q9P2P5 1572 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 IGLV5-37A0A075B6J1 123 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 EME2A4GXA9 379 aaPredicted RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 LRRC72A6NJI9 287 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 A8MV72 311 aaPredicted RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 PRSS2P07478 247 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 ACAA1P09110 424 aaPredicted RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 FCGR1AP12314 374 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 S1PR1P21453 382 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 SAT1P21673 171 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 KCNJ4P48050 445 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 PDLIM4P50479 330 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 RRP1P56182 461 aaKnown RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 SEC61A1P61619 476 aaKnown RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 RUNX1T1Q06455 604 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 LTBQ06643 244 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 GRAPQ13588 217 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 HLFQ16534 295 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 CALCRLQ16602 461 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 C15orf59Q2T9L4 293 aaPredicted RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 RGMBQ6NW40 437 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 RHBDF2Q6PJF5 856 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 CCNI2Q6ZMN8 369 aaPredicted RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 TPRG1Q6ZUI0 275 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 MINDY1Q8N5J2 469 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 IQCF1Q8N6M8 205 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 THAP6Q8TBB0 222 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 DUSP19Q8WTR2 217 aa3.34□□□□□ -1.87
RFC4-211ENST00000460408 PTPMT1Q8WUK0 201 aaPredicted RBP3.34□□□□□ -1.87
RFC4-211ENST00000460408 TANKQ92844 425 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms