RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 CYP4X1Q8N118 509 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 OR8H1Q8NGG4 311 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 OLIG1Q8TAK6 271 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 IPCEF1Q8WWN9 437 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 EDEM1Q92611 657 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 IL22Q9GZX6 179 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 TKTL2Q9H0I9 626 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ELAC1Q9H777 363 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 THG1LQ9NWX6 298 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 PKP3Q9Y446 797 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 MYBPHLA2RUH7 354 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 IL1BP01584 269 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 LTA4HP09960 611 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 FGFR1P11362 822 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ATF6P18850 670 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 C10orf120Q5SQS8 335 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 LCN1P1Q5VSP4 162 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SLC9A4Q6AI14 798 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ERAP2Q6P179 960 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SPESP1Q6UW49 350 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SPATA19Q7Z5L4 167 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 BLOC1S5Q8TDH9 187 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 C2orf15Q8WU43 125 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SLC7A6OSQ96CW6 309 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 PRICKLE1Q96MT3 831 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 HGH1Q9BTY7 390 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 MID1IP1Q9NPA3 183 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SNX15Q9NRS6 342 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF624Q9P2J8 865 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SAE1Q9UBE0 346 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 MTRRQ9UBK8 725 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 MOSPD1Q9UJG1 213 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 PACSIN3Q9UKS6 424 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 FZD10Q9ULW2 581 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SSR3Q9UNL2 185 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 C2orf71A6NGG8 1288 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SPTLC1O15269 473 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 STX11O75558 287 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 GABBR2O75899 941 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 EPHA3P29320 983 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 SLC9A3P48764 834 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 HTRA3P83110 453 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 TSTA3Q13630 321 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 DGKKQ5KSL6 1271 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 LDLRAP1Q5SW96 308 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF773Q6PK81 442 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 NPNTQ6UXI9 565 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 NPAS4Q8IUM7 802 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 EFHBQ8N7U6 833 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 TOR1AIP2Q8NFQ8 470 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 UTP15Q8TED0 518 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 LENG8Q96PV6 779 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 HAPLN3Q96S86 360 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 NPAS2Q99743 824 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 BCL7BQ9BQE9 202 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 AGO3Q9H9G7 860 aaKnown RBP6.16□□□□□ -1.42
VPS13D-202ENST00000460333 GMIPQ9P107 970 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 OR12D3Q9UGF7 316 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF222Q9UK12 451 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 IKZF3Q9UKT9 509 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 B3GNT3Q9Y2A9 372 aa6.16□□□□□ -1.42
VPS13D-202ENST00000460333 TCRBV5S1A1TA0A578 114 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 IRGMA1A4Y4 181 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 GABRDO14764 452 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 IFNA7P01567 189 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 CYP11A1P05108 521 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 HCAR3P49019 387 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 SEPHS1P49903 392 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ANXA11P50995 505 aaKnown RBP6.15□□□□□ -1.42
VPS13D-202ENST00000460333 TBX4P57082 545 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF252P-AS1Q0IIN9 211 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF181Q2M3W8 571 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 PLEKHG6Q3KR16 790 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 TBC1D25Q3MII6 688 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 OGFRL1Q5TC84 451 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-202ENST00000460333 FAM91A1Q658Y4 838 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 REP15Q6BDI9 236 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF549Q6P9A3 640 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 GALNT12Q8IXK2 581 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 MPP5Q8N3R9 675 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 PHF12Q96QT6 1004 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 KCTD15Q96SI1 283 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-202ENST00000460333 TMEM175Q9BSA9 504 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 SLC22A4Q9H015 551 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ITM2BQ9Y287 266 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 PMF1-BGLAPU3KQ54 211 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 PLXNA1Q9UIW2 1896 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 FAM95CA0A1B0GW59 222 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 BCKDKO14874 412 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ORC5O43913 435 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 SYNCRIPO60506 623 aaKnown RBP6.15□□□□□ -1.42
VPS13D-202ENST00000460333 PLIN3O60664 434 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 GCATO75600 419 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 CD48P09326 243 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 TCF4P15884 667 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 GOT1P17174 413 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 L1CAMP32004 1257 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 SLC11A2P49281 568 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 NKX3-2P78367 333 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms