RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 PACS1Q6VY07 963 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 ADGRG6Q86SQ4 1221 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 GATAD2AQ86YP4 633 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 KLHL7Q8IXQ5 586 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 PDIK1LQ8N165 341 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 SPATA4Q8NEY3 305 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 ADAMTS14Q8WXS8 1223 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 CPT1BQ92523 772 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 C16orf45Q96MC5 204 aaPredicted RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 CCM2Q9BSQ5 444 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 BPIFA1Q9NP55 256 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 WHRNQ9P202 907 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 UTP11Q9Y3A2 253 aaKnown RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 DNAJC6O75061 913 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 FTH1P02794 183 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 ZSCAN5DPP0CG00 497 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 OGNP20774 298 aaKnown RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 IDSP22304 550 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 HALP42357 657 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 TTPAP49638 278 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 CBLBQ13191 982 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 ATP13A5Q4VNC0 1218 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 TPRG1LQ5T0D9 272 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 PSAPL1Q6NUJ1 521 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 RBFAQ8N0V3 343 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 CNPY4Q8N129 248 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 SLC25A45Q8N413 288 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 EID2BQ96D98 161 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 DNAJC1Q96KC8 554 aaKnown RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 LINC00615Q96LM1 132 aaPredicted RBP10.58□□□□□ -0.72
UBR4-208ENST00000459947 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 TSPYL1Q9H0U9 437 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 ZNHIT2Q9UHR6 403 aa10.58□□□□□ -0.72
UBR4-208ENST00000459947 SIGLEC6O43699 453 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 URI1O94763 535 aaPredicted RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 ZNF7P17097 686 aaPredicted RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 NSG1P42857 185 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 ARL4CP56559 192 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 SIM1P81133 766 aaPredicted RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 XIAPP98170 497 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 TMEM115Q12893 351 aaPredicted RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 C14orf28Q4W4Y0 310 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 GLE1Q53GS7 698 aaKnown RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 RFLNAQ6ZTI6 216 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 OR2AG1Q9H205 316 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 ATXN10Q9UBB4 475 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 ACSL5Q9ULC5 683 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 MRFAP1Q9Y605 127 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 C17orf113A0A1B0GUU1 675 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 AURKAO14965 403 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 KPNA5O15131 536 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 KDM1AO60341 852 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 VPS41P49754 854 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 INSCQ1MX18 579 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 SLC9B2Q86UD5 537 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 NAT8LQ8N9F0 302 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 HM13Q8TCT9 377 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 APOLD1Q96LR9 279 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 SMIM14Q96QK8 99 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 UCK1Q9HA47 277 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 PADI4Q9UM07 663 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 HEBP2Q9Y5Z4 205 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 PIEZO1Q92508 2521 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 IGLV3-16A0A075B6K0 115 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 EFCAB8A8MWE9 144 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 YY2O15391 372 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 FFAR2O15552 330 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 SDC3O75056 442 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 DKK1O94907 266 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 OR56A5P0C7T3 313 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 ACRV1P26436 265 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 ACTR1BP42025 376 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 SESN2P58004 480 aaPredicted RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 ACTR1AP61163 376 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 RPA4Q13156 261 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 TMED2Q15363 201 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 TRIP13Q15645 432 aaPredicted RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 TAS2R42Q7RTR8 314 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 TAB3Q8N5C8 712 aaPredicted RBP10.57□□□□□ -0.72
UBR4-208ENST00000459947 GLIS1Q8NBF1 620 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 OR13C4Q8NGS5 318 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 OR4L1Q8NH43 312 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 MAPK15Q8TD08 544 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 ZFPM2Q8WW38 1151 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 FAM167BQ9BTA0 163 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 LGR4Q9BXB1 951 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 CATSPERZQ9NTU4 200 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 COMMD10Q9Y6G5 202 aa10.57□□□□□ -0.72
UBR4-208ENST00000459947 GPR179Q6PRD1 2367 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 TPH1P17752 444 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 NDUFS1P28331 727 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 GPR3P46089 330 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 ACADVLP49748 655 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 TUBB4BP68371 445 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 FRG1Q14331 258 aaKnown RBP10.56□□□□□ -0.72
UBR4-208ENST00000459947 TRAPPC5Q8IUR0 188 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 FAM46DQ8NEK8 389 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 KRT12Q99456 494 aa10.56□□□□□ -0.72
UBR4-208ENST00000459947 TAAR2Q9P1P5 351 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms