RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 SYNCRIPO60506 623 aaKnown RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 UBXN7O94888 489 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CCNDBP1O95273 360 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 LYPD3O95274 346 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ACTL6AO96019 429 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 MT-ND5P03915 603 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 KRT19P08727 400 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 G6PDP11413 515 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 GP1BBP13224 206 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CYP4B1P13584 511 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ZNF8P17098 575 aaPredicted RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 DDX5P17844 614 aaKnown RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 VCAM1P19320 739 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 UGT1A1P22309 533 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 AXLP30530 894 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ELF1P32519 619 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 PIK3CAP42336 1068 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 RECQLP46063 649 aaPredicted RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CENPAP49450 140 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 RPS6KA3P51812 740 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 RCAN1P53805 252 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CSTF1Q05048 431 aaKnown RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 EIF4EBP1Q13541 118 aaPredicted RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CAMK1Q14012 370 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 DUOXA1Q1HG43 343 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 SOWAHAQ2M3V2 549 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 FAM182AQ5T1J6 154 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 UTF1Q5T230 341 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 SYDE2Q5VT97 1194 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 RRAGBQ5VZM2 374 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CHST15Q7LFX5 561 aaPredicted RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ABI3BPQ7Z7G0 1075 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 GALNT7Q86SF2 657 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 MAP7D3Q8IWC1 876 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CCDC28AQ8IWP9 274 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 FAM186BQ8IYM0 893 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 OR4N4Q8N0Y3 316 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 GHDCQ8N2G8 530 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 PARP16Q8N5Y8 322 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 OR5AP2Q8NGF4 316 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 OR2T11Q8NH01 316 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 LINC01006Q8NI28 216 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 AFAP1L1Q8TED9 768 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 SLC38A5Q8WUX1 472 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 WDR60Q8WVS4 1066 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 DEDD2Q8WXF8 326 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ARNTL2Q8WYA1 636 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 HSD17B8Q92506 261 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 PHF21AQ96BD5 680 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CENPTQ96BT3 561 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ERLEC1Q96DZ1 483 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ZC3HAV1LQ96H79 300 aaKnown RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 SNX22Q96L94 193 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 RIPOR3Q96MK2 946 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 LGMNQ99538 433 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 NUP88Q99567 741 aaPredicted RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ATF6BQ99941 703 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 C16orf70Q9BSU1 422 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 HAUS8Q9BT25 410 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 MAK16Q9BXY0 300 aaKnown RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 SLC25A39Q9BZJ4 359 aaPredicted RBP-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 TKTL2Q9H0I9 626 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 CXorf56Q9H5V9 222 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 MED20Q9H944 212 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 PLEKHA3Q9HB20 300 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ZNF287Q9HBT7 754 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 MAGEE1Q9HCI5 957 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 PDE11AQ9HCR9 933 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 TRPC7Q9HCX4 862 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 KRT84Q9NSB2 600 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 KLHL9Q9P2J3 617 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 DNAJB4Q9UDY4 337 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 FBXL17Q9UF56 701 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 ATP8A1Q9Y2Q0 1164 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 TAF1P21675 1872 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 SMCHD1A6NHR9 2005 aa-0.08□□□□□ -2.42
SNORD42B-201ENST00000458893 MYH15Q9Y2K3 1946 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 USP19O94966 1318 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 POGZQ7Z3K3 1410 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 LOC105371242A0A075B767 164 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 A0A0G2JNG1 304 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 C15orf61A6NNL5 157 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 A8MZ25 164 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 ANKRD66B4E2M5 251 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 HNRNPRO43390 633 aaKnown RBP-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 ZNF324O75467 553 aaPredicted RBP-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 KHDRBS3O75525 346 aaKnown RBP-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 GJB3O75712 270 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 ZRANB2O95218 330 aaKnown RBP eCLIP-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 CER1O95813 267 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 TFAP2AP05549 437 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 ANXA2P07355 339 aaKnown RBP-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 PNMTP11086 282 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 TBPP20226 339 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 CDK11BP21127 795 aaKnown RBP-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 CHRNA3P32297 505 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 DDIT3P35638 169 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 EIF2S3P41091 472 aaKnown RBP-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 ETV5P41161 510 aa-0.09□□□□□ -2.42
SNORD42B-201ENST00000458893 TSFMP43897 325 aaKnown RBP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms