RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 ARHGEF17Q96PE2 2063 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-205ENST00000456754 TRBV5-4A0A0C4DH59 114 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 FAM237BA0A1B0GVD1 139 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 AGAP14A8MT82 685 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 E7ESA3 106 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 AP3B1O00203 1094 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 OR1I1O60431 355 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 PPFIA2O75334 1257 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 PIAS2O75928 621 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 RASGRP1O95267 797 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 MYF5P13349 255 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 ITGALP20701 1170 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 HTR1BP28222 390 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-205ENST00000456754 ATXN3P54252 364 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-205ENST00000456754 ARL4CP56559 192 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 PPARDQ03181 441 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 PTK2BQ14289 1009 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 ZDHHC20Q5W0Z9 365 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 CAPN12Q6ZSI9 719 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 TMEM135Q86UB9 458 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 SERPINA9Q86WD7 417 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 CCDC25Q86WR0 208 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 DCP2Q8IU60 420 aaKnown RBP13.91□□□□□ -0.18
TIMP1-205ENST00000456754 PHYKPLQ8IUZ5 450 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 PDIK1LQ8N165 341 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 NXPE1Q8N323 547 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 BEND7Q8N7W2 519 aaPredicted RBP13.91□□□□□ -0.18
TIMP1-205ENST00000456754 BBOF1Q8ND07 529 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 FAM174AQ8TBP5 190 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 LMX1AQ8TE12 382 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 SKA1Q96BD8 255 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 CAMK1GQ96NX5 476 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 VPS35Q96QK1 796 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 CDH19Q9H159 772 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 ERVMER34-1Q9H9K5 563 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 TRIM39Q9HCM9 518 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 SAYSD1Q9NPB0 183 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 SAMD15Q9P1V8 674 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 APPL1Q9UKG1 709 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 RIMKLBQ9ULI2 386 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 SLC30A1Q9Y6M5 507 aa13.91□□□□□ -0.18
TIMP1-205ENST00000456754 OR2AG2A6NM03 316 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 TOR1BO14657 336 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 FFAR2O15552 330 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 SGTAO43765 313 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 MAGEC1O60732 1142 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 PIAS1O75925 651 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 CER1O95813 267 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 PYGLP06737 847 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 GIMD1P0DJR0 217 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 CD59P13987 128 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 PGAM1P18669 254 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 DGKAP23743 735 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 AK4P27144 223 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 RXRGP48443 463 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 HK3P52790 923 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 DRG2P55039 364 aaKnown RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 PRAMEP78395 509 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 CACNG1Q06432 222 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 ITGA9Q13797 1035 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 CRYMQ14894 314 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 PYCR3Q53H96 274 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 PRRT3Q5FWE3 981 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 STPG1Q5TH74 334 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 PDPK2PQ6A1A2 396 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 TRMT10BQ6PF06 316 aaKnown RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 AFTPHQ6ULP2 937 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 IL27RAQ6UWB1 636 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 UNC5AQ6ZN44 842 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 NLRP9Q7RTR0 991 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 NRROSQ86YC3 692 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 ZNF547Q8IVP9 402 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 ZBED8Q8IZ13 594 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 FBXO36Q8NEA4 188 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 ZNF548Q8NEK5 533 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 DDHD1Q8NEL9 900 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 OR4L1Q8NH43 312 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 DTX3LQ8TDB6 740 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 SAP25Q8TEE9 199 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 SGF29Q96ES7 293 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 SCARF2Q96GP6 870 aaPredicted RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 ZDHHC5Q9C0B5 715 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 DNAAF2Q9NVR5 837 aaKnown RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 SMOXQ9NWM0 555 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 SLC23A2Q9UGH3 650 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 APOBEC3BQ9UH17 382 aaKnown RBP13.9□□□□□ -0.18
TIMP1-205ENST00000456754 GPSM3Q9Y4H4 160 aa13.9□□□□□ -0.18
TIMP1-205ENST00000456754 USP1O94782 785 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 IVLP07476 585 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 ERVK-10P10266 1014 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 ACRV1P26436 265 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 AKT1P31749 480 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 CCT8P50990 548 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 TMEM115Q12893 351 aaPredicted RBP13.89□□□□□ -0.19
TIMP1-205ENST00000456754 DEFB133Q30KQ1 61 aa13.89□□□□□ -0.19
TIMP1-205ENST00000456754 GLE1Q53GS7 698 aaKnown RBP13.89□□□□□ -0.19
TIMP1-205ENST00000456754 ZNF789Q5FWF6 425 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms