RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RING1Q06587 406 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 PMS2P3Q13401 168 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 AAK1Q2M2I8 961 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 GPR107Q5VW38 600 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 ANKRD34AQ69YU3 496 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 LINGO4Q6UY18 593 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 ANKRD33Q7Z3H0 272 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 ISCA2Q86U28 154 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 TMEM126BQ8IUX1 230 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 CMTR2Q8IYT2 770 aaKnown RBP12.33□□□□□ -0.43
LINC00959-201ENST00000456581 PTGR2Q8N8N7 351 aaPredicted RBP12.33□□□□□ -0.43
LINC00959-201ENST00000456581 TRPC4APQ8TEL6 797 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 TTLL2Q9BWV7 592 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 MID1IP1Q9NPA3 183 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 CMTM6Q9NX76 183 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 UTP6Q9NYH9 597 aaKnown RBP12.33□□□□□ -0.43
LINC00959-201ENST00000456581 FNDC3AQ9Y2H6 1198 aaKnown RBP12.33□□□□□ -0.43
LINC00959-201ENST00000456581 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 ANAPC1Q9H1A4 1944 aa12.33□□□□□ -0.43
LINC00959-201ENST00000456581 CHD5Q8TDI0 1954 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 H3BNC9 293 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 AXIN1O15169 862 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 PRAMEF11O60813 436 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 CSF2RAP15509 400 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 PRDX3P30048 256 aaKnown RBP12.33□□□□□ -0.44
LINC00959-201ENST00000456581 CA8P35219 290 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 POU4F1Q01851 419 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 SEMA3AQ14563 771 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF235Q14590 738 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 ARHGEF6Q15052 776 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 OR4D1Q15615 310 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 MAP7D1Q3KQU3 841 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 HECTD3Q5T447 861 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TBPL2Q6SJ96 375 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 LRRC49Q8IUZ0 686 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TEX26Q8N6G2 289 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 OR2T34Q8NGX1 318 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 OR2T3Q8NH03 318 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF461Q8TAF7 563 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 DDI1Q8WTU0 396 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TFAP2CQ92754 450 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TANKQ92844 425 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TBATAQ96M53 351 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 HBEGFQ99075 208 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 ATP13A1Q9HD20 1204 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TMEM39AQ9NV64 488 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 POLR3BQ9NW08 1133 aaPredicted RBP12.33□□□□□ -0.44
LINC00959-201ENST00000456581 NSMCE4AQ9NXX6 385 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 IKZF3Q9UKT9 509 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 SH3BP1Q9Y3L3 701 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 COL4A6Q14031 1691 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 REV3LO60673 3130 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 A0A087X1B8 175 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 FXYD1O00168 92 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 NRG2O14511 850 aaPredicted RBP12.33□□□□□ -0.44
LINC00959-201ENST00000456581 ADSLP30566 484 aaPredicted RBP12.33□□□□□ -0.44
LINC00959-201ENST00000456581 NAA20P61599 178 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TAF12Q16514 161 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF678Q5SXM1 525 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 AGAP9Q5VTM2 703 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 KLC3Q6P597 504 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 TTC33Q6PID6 262 aaPredicted RBP12.33□□□□□ -0.44
LINC00959-201ENST00000456581 SLC15A3Q8IY34 581 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 RNF168Q8IYW5 571 aaPredicted RBP12.33□□□□□ -0.44
LINC00959-201ENST00000456581 OR13C4Q8NGS5 318 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 ISOC1Q96CN7 298 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 SLC25A23Q9BV35 468 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 SEMA4BQ9NPR2 832 aaPredicted RBP12.33□□□□□ -0.44
LINC00959-201ENST00000456581 PNPLA3Q9NST1 481 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 VWA7Q9Y334 891 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 YIPF1Q9Y548 306 aa12.33□□□□□ -0.44
LINC00959-201ENST00000456581 RNF103-CHMP3A0A140T963 221 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 CBX4O00257 560 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 EI24O14681 340 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 INPP4BO15327 924 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 BAIAP3O94812 1187 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 CDK14O94921 469 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 PAMP19021 973 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 CDK9P50750 372 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 DNAJB13P59910 316 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 GNA12Q03113 381 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 IL10RBQ08334 325 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TWF1Q12792 350 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 PPP1R8Q12972 351 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 BNIP3Q12983 259 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 SAMD4BQ5PRF9 694 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 ZNF549Q6P9A3 640 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 SNX29P2Q8IUI4 249 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 PBXIP1Q96AQ6 731 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 UBXN10Q96LJ8 280 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 C1orf50Q9BV19 199 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 PDFQ9HBH1 243 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
LINC00959-201ENST00000456581 TBX21Q9UL17 535 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 LDB2O43679 373 aa12.32□□□□□ -0.44
LINC00959-201ENST00000456581 SNAP91O60641 907 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms