RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 DSPP15924 2871 aaKnown RBP20.97■□□□□ 0.95
HMGB3-205ENST00000455596 A0A0U1RQJ8 604 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 CHUKO15111 745 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 VEGFDO43915 354 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 ZNF189O75820 626 aaPredicted RBP20.97■□□□□ 0.95
HMGB3-205ENST00000455596 EML2O95834 649 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 CD1CP29017 333 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 SPAM1P38567 509 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 PRPSAP1Q14558 356 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 CMKLR1Q99788 373 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 FICDQ9BVA6 458 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 PRORYQ9H606 182 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 STN1Q9H668 368 aaKnown RBP20.97■□□□□ 0.95
HMGB3-205ENST00000455596 IL17CQ9P0M4 197 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 PACSIN2Q9UNF0 486 aaPredicted RBP20.97■□□□□ 0.95
HMGB3-205ENST00000455596 AAR2Q9Y312 384 aaKnown RBP20.97■□□□□ 0.95
HMGB3-205ENST00000455596 PKP3Q9Y446 797 aa20.97■□□□□ 0.95
HMGB3-205ENST00000455596 IGHV1OR21-1A0A087WYE8 117 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 GOLGA6L9A6NEM1 432 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 KMOO15229 486 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 KLK10O43240 276 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 SNX2O60749 519 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 MTX2O75431 263 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 FTCDO95954 541 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 AGTP01019 485 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 F3P13726 295 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 HGFP14210 728 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 CLCNKAP51800 687 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 GPLD1P80108 840 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 HHEXQ03014 270 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 INSCQ1MX18 579 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 ATP13A5Q4VNC0 1218 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 IYDQ6PHW0 289 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 CRTC3Q6UUV7 619 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 LRRTM4Q86VH4 590 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 TTC13Q8NBP0 860 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 DTX3LQ8TDB6 740 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 SLC38A3Q99624 504 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 GORASP1Q9BQQ3 440 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 NUDT22Q9BRQ3 303 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 AKAP7Q9P0M2 348 aaPredicted RBP20.96■□□□□ 0.95
HMGB3-205ENST00000455596 PISDQ9UG56 409 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 PCDHGA7Q9Y5G6 932 aa20.96■□□□□ 0.95
HMGB3-205ENST00000455596 OR5K4A6NMS3 321 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 AGRPO00253 132 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 DDX3YO15523 660 aaKnown RBP20.95■□□□□ 0.94
HMGB3-205ENST00000455596 CDK14O94921 469 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 PSMB4P28070 264 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 SQSTM1Q13501 440 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.95■□□□□ 0.94
HMGB3-205ENST00000455596 NKAIN2Q5VXU1 208 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 SLC9B2Q86UD5 537 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 JAMLQ86YT9 394 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 GDAP1Q8TB36 358 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 BRSK1Q8TDC3 778 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 SH3KBP1Q96B97 665 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 AHCYL2Q96HN2 611 aaKnown RBP20.95■□□□□ 0.94
HMGB3-205ENST00000455596 SPATA13Q96N96 652 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 FCRL3Q96P31 734 aaPredicted RBP20.95■□□□□ 0.94
HMGB3-205ENST00000455596 PPP1R2P1Q96PQ5 205 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 DPYSL5Q9BPU6 564 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 OSGEPL1Q9H4B0 414 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 SARS2Q9NP81 518 aaKnown RBP20.95■□□□□ 0.94
HMGB3-205ENST00000455596 IL26Q9NPH9 171 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 KLC4Q9NSK0 619 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 TMPRSS11EQ9UL52 423 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 CELSR3Q9NYQ7 3312 aa20.95■□□□□ 0.94
HMGB3-205ENST00000455596 KIR2DS5A0A0G2JLQ3 304 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 A0A0G2JNG1 304 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 A6NCN8 305 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 KIR2DS3K7RE56 304 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 PPFIA2O75334 1257 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 ITIH1P19827 911 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 SLC5A2P31639 672 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 PPM1FP49593 454 aaPredicted RBP20.94■□□□□ 0.94
HMGB3-205ENST00000455596 LIMK2P53671 638 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 UCNP55089 124 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 TMPRSS3P57727 454 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 GSDMDP57764 484 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 GTF2H3Q13889 308 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 KIR2DS5Q14953 304 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 PLA2G4EQ3MJ16 856 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 FAM151BQ6UXP7 276 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 RANBP10Q6VN20 620 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 ZNF574Q6ZN55 896 aaPredicted RBP20.94■□□□□ 0.94
HMGB3-205ENST00000455596 ZNF761Q86XN6 746 aaPredicted RBP20.94■□□□□ 0.94
HMGB3-205ENST00000455596 RNF10Q8N5U6 811 aaKnown RBP20.94■□□□□ 0.94
HMGB3-205ENST00000455596 AVL9Q8NBF6 648 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 OR4D9Q8NGE8 314 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 OR10G6Q8NH81 332 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 CCDC110Q8TBZ0 833 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 ZMYND15Q9H091 742 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 CAPN6Q9Y6Q1 641 aa20.94■□□□□ 0.94
HMGB3-205ENST00000455596 IGHV5-10-1A0A0J9YXX1 117 aa20.93■□□□□ 0.94
HMGB3-205ENST00000455596 GLYATL1P3A0A0U1RQE8 302 aa20.93■□□□□ 0.94
HMGB3-205ENST00000455596 HGSO14964 777 aaPredicted RBP20.93■□□□□ 0.94
HMGB3-205ENST00000455596 STX7O15400 261 aaKnown RBP20.93■□□□□ 0.94
HMGB3-205ENST00000455596 BUD23O43709 281 aaKnown RBP20.93■□□□□ 0.94
HMGB3-205ENST00000455596 DUX1O43812 170 aa20.93■□□□□ 0.94
HMGB3-205ENST00000455596 ZNF7P17097 686 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms