RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 XPO4Q9C0E2 1151 aaKnown RBP7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 ISCUQ9H1K1 167 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 PCDH9Q9HC56 1237 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 PCDH18Q9HCL0 1135 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 ETNK2Q9NVF9 386 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 RBM22Q9NW64 420 aaKnown RBP eCLIP7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 TBC1D29Q9UFV1 150 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 LCMT1Q9UIC8 334 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 POLHQ9Y253 713 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 KCNK6Q9Y257 313 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 CHKBQ9Y259 395 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 PLEKHM1Q9Y4G2 1056 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 TTLL3Q9Y4R7 772 aa7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 SPTBN1Q01082 2364 aaKnown RBP7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 ZNF106Q9H2Y7 1883 aaKnown RBP7.93□□□□□ -1.14
NIF3L1-209ENST00000454952 A6NCN8 305 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 POM121CA8CG34 1229 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 C21orf140B9A014 251 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 MYO1FO00160 1098 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 DDX3XO00571 662 aaKnown RBP eCLIP7.92□□□□□ -1.147e-8■■■■□ 19.5
NIF3L1-209ENST00000454952 RFPL1O75677 317 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 UBXN7O94888 489 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 CLDN7O95471 211 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 VIPP01282 170 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 C9P02748 559 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 ATP1A1P05023 1023 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 AMD1P17707 334 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 VCLP18206 1134 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 XRCC1P18887 633 aaPredicted RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 OAS2P29728 719 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 DLSTP36957 453 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 SSR1P43307 286 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 DCDC1P59894 354 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 DSC2Q02487 901 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 FOXM1Q08050 763 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 PAFAH1B3Q15102 231 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 PDK2Q15119 407 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 ZNF569Q5MCW4 686 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 CCDC183Q5T5S1 534 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 C16orf46Q6P387 395 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 RFLNAQ6ZTI6 216 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 TMEM26Q6ZUK4 368 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 TIPARPQ7Z3E1 657 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 BPHLQ86WA6 291 aaPredicted RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 CCDC13Q8IYE1 715 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 UNC5BQ8IZJ1 945 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 TEX19Q8NA77 164 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 LPCAT1Q8NF37 534 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 FAM71BQ8TC56 605 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 C9orf72Q96LT7 481 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 AGAP2Q99490 1192 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 ZNF670Q9BS34 389 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 ZSCAN5AQ9BUG6 496 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 MLPHQ9BV36 600 aaPredicted RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 OSGEPL1Q9H4B0 414 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 ZNF768Q9H5H4 540 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 TRIM39Q9HCM9 518 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 PRDM8Q9NQV8 689 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 LMBRD1Q9NUN5 540 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 POT1Q9NUX5 634 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 SIDT1Q9NXL6 827 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 KLHL3Q9UH77 587 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 ANAPC7Q9UJX3 599 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 CNOT6Q9ULM6 557 aaKnown RBP7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 KCNMB2Q9Y691 235 aa7.92□□□□□ -1.14
NIF3L1-209ENST00000454952 GOLGA6L3A6NEY3 463 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 ANKRD66B4E2M5 251 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 KMOO15229 486 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 VEGFDO43915 354 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 MFSD11O43934 449 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 KCNJ13O60928 360 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 RASSF9O75901 435 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 SLC25A14O95258 325 aaPredicted RBP7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 NDUFA10O95299 355 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 EML2O95834 649 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 MBD3O95983 291 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 KRT7P08729 469 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 CD97P48960 835 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 PMS2P54278 862 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 UBE2IP63279 158 aaKnown RBP7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 SLC25A11Q02978 314 aaKnown RBP7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 PTPRRQ15256 657 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 NR6A1Q15406 480 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 IGFBP7Q16270 282 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 INSCQ1MX18 579 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 TDRD12Q587J7 1177 aaKnown RBP7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 FIGNQ5HY92 759 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 KLHL35Q6PF15 583 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 WASH2PQ6VEQ5 465 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 ASB18Q6ZVZ8 466 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 PRSS42Q7Z5A4 293 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 RASGRP3Q8IV61 690 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 TRAM1L1Q8N609 369 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 KCTD6Q8NC69 237 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 SYN2Q92777 582 aaPredicted RBP7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 MIB2Q96AX9 1013 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 IQCDQ96DY2 449 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 FCRL4Q96PJ5 515 aa7.91□□□□□ -1.14
NIF3L1-209ENST00000454952 PLEKHG4BQ96PX9 1271 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms