RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PSMC3IPQ9P2W1 217 aaPredicted RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 NFKBIL1Q9UBC1 381 aaPredicted RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 ZNF180Q9UJW8 692 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 APPL1Q9UKG1 709 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 MED16Q9Y2X0 877 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 PCYT1BQ9Y5K3 369 aaPredicted RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 OAS3Q9Y6K5 1087 aaKnown RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 H0Y8X5 98 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 GOLGA8RI6L899 631 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 SGTAO43765 313 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 CDH16O75309 829 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 RFPL1O75677 317 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 SEMA4FO95754 770 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 ALDOAP04075 364 aaKnown RBP10.88□□□□□ -0.67
SCN9A-205ENST00000454569 PCCBP05166 539 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 OGNP20774 298 aaKnown RBP10.88□□□□□ -0.67
SCN9A-205ENST00000454569 BCKDHBP21953 392 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 NFKBIAP25963 317 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 ACRV1P26436 265 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 IGFALSP35858 605 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 LIMK2P53671 638 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 PTPN5P54829 565 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 CDKN2DP55273 166 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 CLDN2P57739 230 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 RPS21P63220 83 aaKnown RBP10.88□□□□□ -0.67
SCN9A-205ENST00000454569 ZNF460Q14592 562 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 PPM1JQ5JR12 505 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 GPRC6AQ5T6X5 926 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 LCE2DQ5TA82 110 aaPredicted RBP10.88□□□□□ -0.67
SCN9A-205ENST00000454569 GRTP1Q5TC63 336 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 MRNIPQ6NTE8 343 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 RETREG3Q86VR2 466 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 SLC41A1Q8IVJ1 513 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 CEP97Q8IW35 865 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 NRSN1Q8IZ57 195 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 OR2T34Q8NGX1 318 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 CALML6Q8TD86 181 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 TLCD1Q96CP7 247 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 OLFM1Q99784 485 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 ORAI3Q9BRQ5 295 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 P2RY12Q9H244 342 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 C12orf65Q9H3J6 166 aaKnown RBP10.88□□□□□ -0.67
SCN9A-205ENST00000454569 PREBQ9HCU5 417 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 CRLS1Q9UJA2 301 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 FANCMQ8IYD8 2048 aa10.88□□□□□ -0.67
SCN9A-205ENST00000454569 UBA6A0AVT1 1052 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-205ENST00000454569 RGSL1A5PLK6 1076 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 POM121BA6NF01 834 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 RGS16O15492 202 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-205ENST00000454569 DNAJC6O75061 913 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 MYZAPP0CAP1 466 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 ITGALP20701 1170 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 SAT1P21673 171 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 CD6P30203 668 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 CD151P48509 253 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 FNTBP49356 437 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 CSRP3P50461 194 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 CSE1LP55060 971 aaKnown RBP10.87□□□□□ -0.67
SCN9A-205ENST00000454569 TAS2R39P59534 338 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 DPTQ07507 201 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 SRSF5Q13243 272 aaKnown RBP10.87□□□□□ -0.67
SCN9A-205ENST00000454569 NAB1Q13506 487 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 PDE1CQ14123 709 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-205ENST00000454569 INPP5AQ14642 412 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 AGERQ15109 404 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 RASA2Q15283 850 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 TPRG1LQ5T0D9 272 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 RAET1GQ6H3X3 334 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 KIAA1161Q6NSJ0 714 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 PNCKQ6P2M8 343 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 TMEM207Q6UWW9 146 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 NAPRTQ6XQN6 538 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 KIAA0408Q6ZU52 694 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 TRABD2AQ86V40 505 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 PIM3Q86V86 326 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 BTN2A2Q8WVV5 523 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 TMEM131Q92545 1883 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 GLYATL1Q969I3 302 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 BIRC7Q96CA5 298 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 PGM2Q96G03 612 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 GPR22Q99680 433 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 RHOJQ9H4E5 214 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 SGK2Q9HBY8 427 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 OR1A2Q9Y585 309 aa10.87□□□□□ -0.67
SCN9A-205ENST00000454569 ARHGEF17Q96PE2 2063 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-205ENST00000454569 IGLV3-16A0A075B6K0 115 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 FAM95CA0A1B0GW59 222 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 FAM86C2PA6NEL3 165 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 TPP1O14773 563 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 AXIN1O15169 862 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 PHGDHO43175 533 aaKnown RBP10.86□□□□□ -0.67
SCN9A-205ENST00000454569 LATO43561 262 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 NIPSNAP2O75323 286 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 NDUFS3O75489 264 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 FSBPO95073 299 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 FUCA1P04066 466 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 IVLP07476 585 aa10.86□□□□□ -0.67
SCN9A-205ENST00000454569 SNRPAP09012 282 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms