RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ARFGAP3Q9NP61 516 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 SPATS2LQ9NUQ6 558 aaKnown RBP14□□□□□ -0.17
HDAC4-205ENST00000454542 PIH1D1Q9NWS0 290 aaKnown RBP14□□□□□ -0.17
HDAC4-205ENST00000454542 MSRB2Q9Y3D2 182 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 WDFY3Q8IZQ1 3526 aa14□□□□□ -0.17
HDAC4-205ENST00000454542 IGLV3-16A0A075B6K0 115 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 B4DGG1 531 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 E7EVH7 732 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A9O60656 530 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 MTX2O75431 263 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 KRT14P02533 472 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 PNLIPP16233 465 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 TPH1P17752 444 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A6P19224 532 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A1P22309 533 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A4P22310 534 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A3P35503 534 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A5P35504 534 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 ACTR1BP42025 376 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 ACTR1AP61163 376 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 BASP1P80723 227 aaKnown RBP13.99□□□□□ -0.17
HDAC4-205ENST00000454542 E2F1Q01094 437 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 HES3Q5TGS1 186 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 SLC30A9Q6PML9 568 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 CCNI2Q6ZMN8 369 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-205ENST00000454542 GSTA5Q7RTV2 222 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 SNX20Q7Z614 316 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 LRRTM4Q86VH4 590 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 TMPRSS12Q86WS5 348 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 NAGSQ8N159 534 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 OR13J1Q8NGT2 312 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 ZNF398Q8TD17 642 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 ZCCHC2Q9C0B9 1178 aaKnown RBP13.99□□□□□ -0.17
HDAC4-205ENST00000454542 SUDS3Q9H7L9 328 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A7Q9HAW7 530 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A10Q9HAW8 530 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 UGT1A8Q9HAW9 530 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 SIRPGQ9P1W8 387 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 RABGEF1Q9UJ41 708 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 PADI4Q9UM07 663 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 TCAF1Q9Y4C2 921 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 GPSM3Q9Y4H4 160 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 SAR1BQ9Y6B6 198 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 CEP295Q9C0D2 2601 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 ASXL3Q9C0F0 2248 aa13.99□□□□□ -0.17
HDAC4-205ENST00000454542 RP1P56715 2156 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 TCRBV7S3A2A0A539 114 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 HEATR9A2RTY3 570 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 CTAGE9A4FU28 777 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 CCL22O00626 93 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 NTN3O00634 580 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-205ENST00000454542 SGTAO43765 313 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 NUDT21O43809 227 aaKnown RBP13.98□□□□□ -0.17
HDAC4-205ENST00000454542 OPA1O60313 960 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 TMEM63AO94886 807 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 ACP5P13686 325 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 GLB1P16278 677 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 ITGALP20701 1170 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 MC4RP32245 332 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 FASLGP48023 281 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 LMAN1P49257 510 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 ARSDP51689 593 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 CTSCP53634 463 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 B4GALNT1Q00973 533 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 DMPKQ09013 629 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 TMEM115Q12893 351 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-205ENST00000454542 CAMK2BQ13554 666 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 SEPT6Q14141 434 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 PPP1R21Q6ZMI0 780 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 NXPE1Q8N323 547 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 C17orf53Q8N3J3 647 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-205ENST00000454542 DCBLD1Q8N8Z6 715 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 DNAAF3Q8N9W5 541 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 GRK7Q8WTQ7 553 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 ZDHHC1Q8WTX9 485 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 CCDC74AQ96AQ1 378 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 ULK4Q96C45 1275 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 CDKN2AIPNLQ96HQ2 116 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 ASB8Q9H765 288 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 PCYOX1Q9UHG3 505 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 PRKAB1Q9Y478 270 aa13.98□□□□□ -0.17
HDAC4-205ENST00000454542 AKAP13Q12802 2813 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 AP3B1O00203 1094 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 KMOO15229 486 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CDK14O94921 469 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 EML2O95834 649 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 ADRA1DP25100 572 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 FOXN2P32314 431 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 PDX1P52945 283 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 MAZP56270 477 aaKnown RBP13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CLDN6P56747 220 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 TMPRSS15P98073 1019 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 GPS1Q13098 491 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 LAMB3Q13751 1172 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 TRIP13Q15645 432 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-205ENST00000454542 KCTD19Q17RG1 926 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-205ENST00000454542 GPR33Q49SQ1 333 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 BCL7AQ4VC05 210 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 CCDC38Q502W7 563 aa13.97□□□□□ -0.17
HDAC4-205ENST00000454542 TSTD2Q5T7W7 516 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms