RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 GPR63Q9BZJ6 419 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 DYRK4Q9NR20 520 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 C20orf96Q9NUD7 363 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 MOCS1Q9NZB8 636 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 DKK3Q9UBP4 350 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 BCAP29Q9UHQ4 241 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 PADI4Q9UM07 663 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 ZNF711Q9Y462 761 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 SPO11Q9Y5K1 396 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 ZCWPW2A0A1B0GU75 182 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 TSPAN11A1L157 253 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 MROH6A6NGR9 719 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CAPN8A6NHC0 703 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 KPNA3O00505 521 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 LDB2O43679 373 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 GLRA3O75311 464 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 PRKCGP05129 697 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CYP2A6P11509 494 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 LPOP22079 712 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 NTSR1P30989 418 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 KIR2DL1P43626 348 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 RPL5P46777 297 aaKnown RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 MRPS21P82921 87 aaKnown RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 CREB5Q02930 508 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 ZP2Q05996 745 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 ENPP2Q13822 863 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CCNIQ14094 377 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 PDK3Q15120 406 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 MLF2Q15773 248 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 FAM46CQ5VWP2 391 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 KIAA0930Q6ICG6 404 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 BORAQ6PGQ7 559 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 UGT2A3Q6UWM9 527 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CDHR3Q6ZTQ4 885 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 KCNMB4Q86W47 210 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 FCRL3Q96P31 734 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 ACOX2Q99424 681 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 PLAC1Q9HBJ0 212 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 TREX1Q9NSU2 369 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 RAB26Q9ULW5 256 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 APOBEC2Q9Y235 224 aaKnown RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 ARL5AQ9Y689 179 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CKAP5Q14008 2032 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 STX7O15400 261 aaKnown RBP15.75■□□□□ 0.11
SNX17-204ENST00000453453 CTSLP07711 333 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 CCDC166P0CW27 439 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 CPA3P15088 417 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 WASP42768 502 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 HSPA13P48723 471 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 ALDH18A1P54886 795 aaKnown RBP15.75■□□□□ 0.11
SNX17-204ENST00000453453 PRAMEP78395 509 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 INSCQ1MX18 579 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 C2orf27AQ580R0 203 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 SFT2D3Q587I9 215 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 ESRP1Q6NXG1 681 aaKnown RBP15.75■□□□□ 0.11
SNX17-204ENST00000453453 TRMT10BQ6PF06 316 aaKnown RBP15.75■□□□□ 0.11
SNX17-204ENST00000453453 RBM12BQ8IXT5 1001 aaKnown RBP15.75■□□□□ 0.11
SNX17-204ENST00000453453 ICA1LQ8NDH6 482 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 MRPS26Q9BYN8 205 aaKnown RBP15.75■□□□□ 0.11
SNX17-204ENST00000453453 FBRSQ9HAH7 460 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 ZDHHC4Q9NPG8 344 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 TIMMDC1Q9NPL8 285 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 PRSS16Q9NQE7 514 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 NSMCE4AQ9NXX6 385 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 TXNDC16Q9P2K2 825 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 HCN2Q9UL51 889 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 PRPF19Q9UMS4 504 aaKnown RBP15.75■□□□□ 0.11
SNX17-204ENST00000453453 PKP3Q9Y446 797 aa15.75■□□□□ 0.11
SNX17-204ENST00000453453 C1orf232A0A0U1RR37 186 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 C16orf96A6NNT2 1141 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 UPK3BL1B0FP48 263 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 UPK3BL2E5RIL1 263 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 RPP40O75818 363 aaKnown RBP15.74■□□□□ 0.11
SNX17-204ENST00000453453 VAPBO95292 243 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 SLC4A1P02730 911 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 ALPIP09923 528 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 ITGB7P26010 798 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 HNF1BP35680 557 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 HADHAP40939 763 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 PRKCQQ04759 706 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 CNGA3Q16281 694 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 MMEL1Q495T6 779 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 ERAP2Q6P179 960 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 B3GNT6Q6ZMB0 384 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 ZNF852Q6ZMS4 543 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 ZSWIM9Q86XI8 627 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 MDGA1Q8NFP4 955 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 CALML6Q8TD86 181 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 SCRN2Q96FV2 425 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 CLPTM1LQ96KA5 538 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 ZNF778Q96MU6 729 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 MCCC1Q96RQ3 725 aaPredicted RBP15.74■□□□□ 0.11
SNX17-204ENST00000453453 FAM129BQ96TA1 746 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 ZFYVE1Q9HBF4 777 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 NLE1Q9NVX2 485 aaPredicted RBP15.74■□□□□ 0.11
SNX17-204ENST00000453453 IRAK4Q9NWZ3 460 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 CHCHD3Q9NX63 227 aaKnown RBP15.74■□□□□ 0.11
SNX17-204ENST00000453453 SLC2A6Q9UGQ3 507 aa15.74■□□□□ 0.11
SNX17-204ENST00000453453 MRPS17Q9Y2R5 130 aaKnown RBP15.74■□□□□ 0.11
SNX17-204ENST00000453453 PPIL1Q9Y3C6 166 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms