RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 KLK10O43240 276 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 NUDT21O43809 227 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 CLDN7O95471 211 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 FUCA1P04066 466 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 PYGLP06737 847 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 AK4P27144 223 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 CD86P42081 329 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 POLD2P49005 469 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 RPL26P61254 145 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 VSNL1P62760 191 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 EIF3IQ13347 325 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 HLTFQ14527 1009 aaKnown RBP eCLIP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 SLC30A9Q6PML9 568 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 RFLNAQ6ZTI6 216 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 ZNF765Q7L2R6 523 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 RAB11FIP2Q7L804 512 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 GPR155Q7Z3F1 870 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 FBXO39Q8N4B4 442 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 BBOF1Q8ND07 529 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.88■□□□□ 0.453e-7■■■■■ 32.1
SQSTM1-204ENST00000453046 LRRC45Q96CN5 670 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 CCDC97Q96F63 343 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 SPATA13Q96N96 652 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 UBL7Q96S82 380 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 PARD6BQ9BYG5 372 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 DPH1Q9BZG8 443 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 CDH19Q9H159 772 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 C10orf88Q9H8K7 445 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 TAAR2Q9P1P5 351 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 WHRNQ9P202 907 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 RPL26L1Q9UNX3 145 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 SLC17A4Q9Y2C5 497 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 TMEM98Q9Y2Y6 226 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 LOC400499M0QZD8 3231 aa17.88■□□□□ 0.45
SQSTM1-204ENST00000453046 C1orf232A0A0U1RR37 186 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 ESYT3A0FGR9 886 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 PMS2P1A4D2B8 440 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 RHPN2P1A8MT19 583 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 PLD2O14939 933 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 ZW10O43264 779 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 ASMTLO95671 621 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 PRLP01236 227 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 IVLP07476 585 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 MLLT3P42568 568 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 RPL21P46778 160 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 STC1P52823 247 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 UCNP55089 124 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 MAZP56270 477 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 IFI35P80217 286 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 CTBSQ01459 385 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 COL9A2Q14055 689 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 IHHQ14623 411 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 ADAMTSL4Q6UY14 1074 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 MARK2Q7KZI7 788 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 SPRED1Q7Z699 444 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 NLRP8Q86W28 1048 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 NRROSQ86YC3 692 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 NRSN1Q8IZ57 195 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 GLIS1Q8NBF1 620 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 PRR11Q96HE9 360 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 BBC3Q96PG8 261 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 MLPHQ9BV36 600 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 RIOK2Q9BVS4 552 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 TRIM31Q9BZY9 425 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 DPH5Q9H2P9 285 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 WDR70Q9NW82 654 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 SEPT10Q9P0V9 454 aa17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 ATXN7L1Q9ULK2 861 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-204ENST00000453046 PTPRQQ9UMZ3 2332 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 CCDC151A5D8V7 595 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 DYNC1I1O14576 645 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 INPP4BO15327 924 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 SEC31AO94979 1220 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 SOD1P00441 154 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 FGF1P05230 155 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 ITGA2BP08514 1039 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 JMJD7P0C870 316 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 IVDP26440 423 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 ADCY8P40145 1251 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 VPS41P49754 854 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 TMPRSS3P57727 454 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 WASHC5Q12768 1159 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 GPS1Q13098 491 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 ZBTB17Q13105 803 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 CALCOCO2Q13137 446 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 BRD3Q15059 726 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 TRIP13Q15645 432 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 B4GALNT4Q76KP1 1039 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 TRIM74Q86UV6 250 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 PTCD2Q8WV60 388 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 OR2M4Q96R27 311 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 AGAP2Q99490 1192 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 ADGRE3Q9BY15 652 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 ARGLU1Q9NWB6 273 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 PKD2L2Q9NZM6 624 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 SNX24Q9Y343 169 aa17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 COL27A1Q8IZC6 1860 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-204ENST00000453046 CDRT15L2A8MXV6 281 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 ANKRD66B4E2M5 251 aa17.85■□□□□ 0.45
SQSTM1-204ENST00000453046 AGRPO00253 132 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms