RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 LTB4R2Q9NPC1 389 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 POLR3BQ9NW08 1133 aaPredicted RBP10.65□□□□□ -0.7
PKP4-206ENST00000452162 PLK2Q9NYY3 685 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 KMT2EQ8IZD2 1858 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 PRR33A8MZF0 331 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 H0Y626 953 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 MAN2B1O00754 1011 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 SDHDO14521 159 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 SLC22A2O15244 555 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 CIB2O75838 187 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 ADH1CP00326 375 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 ADH5P11766 374 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 HNRNPLP14866 589 aaKnown RBP eCLIP10.65□□□□□ -0.712e-6■■■□□ 17.5
PKP4-206ENST00000452162 ZNF37AP17032 561 aaPredicted RBP10.65□□□□□ -0.71
PKP4-206ENST00000452162 ITGAXP20702 1163 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 PIK3R1P27986 724 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 SLC6A11P48066 632 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 BTKQ06187 659 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 MESP2Q0VG99 397 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 RCN1Q15293 331 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 PDCD2Q16342 344 aaPredicted RBP10.65□□□□□ -0.71
PKP4-206ENST00000452162 TRMT5Q32P41 509 aaKnown RBP10.65□□□□□ -0.71
PKP4-206ENST00000452162 INO80DQ53TQ3 878 aaPredicted RBP10.65□□□□□ -0.71
PKP4-206ENST00000452162 RALGPS1Q5JS13 557 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 RIPOR1Q6ZS17 1223 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.65□□□□□ -0.71
PKP4-206ENST00000452162 ZNF687Q8N1G0 1237 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 FBXL6Q8N531 539 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 NAT16Q8N8M0 369 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 WFDC5Q8TCV5 224 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 L3HYPDHQ96EM0 354 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 GSTO2Q9H4Y5 243 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 TNFRSF12AQ9NP84 129 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 MED16Q9Y2X0 877 aa10.65□□□□□ -0.71
PKP4-206ENST00000452162 TRPC5OSA6NMA1 111 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 FAM170BA6NMN3 283 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 C2orf81A6NN90 581 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 ANKRD66B4E2M5 251 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 NEDD8-MDP1E9PL57 170 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 DCNP07585 359 aaKnown RBP10.64□□□□□ -0.71
PKP4-206ENST00000452162 CD1EP15812 388 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 LPOP22079 712 aaPredicted RBP10.64□□□□□ -0.71
PKP4-206ENST00000452162 PMLP29590 882 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 GCKP35557 465 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 OPRD1P41143 372 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 GALK1P51570 392 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 PLK1P53350 603 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 ACTR3P61158 418 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 SATB1Q01826 763 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 GALNT1Q10472 559 aaPredicted RBP10.64□□□□□ -0.71
PKP4-206ENST00000452162 FZD5Q13467 585 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 SETMARQ53H47 684 aaPredicted RBP10.64□□□□□ -0.71
PKP4-206ENST00000452162 PGM2L1Q6PCE3 622 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 TTC30BQ8N4P2 665 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 PJA1Q8NG27 643 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 ACTRT2Q8TDY3 377 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 LENG8Q96PV6 779 aaPredicted RBP10.64□□□□□ -0.71
PKP4-206ENST00000452162 TCF12Q99081 682 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 TACO1Q9BSH4 297 aaKnown RBP10.64□□□□□ -0.71
PKP4-206ENST00000452162 RTKNQ9BST9 563 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 BBS2Q9BXC9 721 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 ADGRE3Q9BY15 652 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 VPS51Q9UID3 782 aa10.64□□□□□ -0.71
PKP4-206ENST00000452162 LOC100653049A0A140TA62 436 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 TRIM24O15164 1050 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 CCNT2O60583 730 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 KRT34O76011 436 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 IMPDH1P20839 514 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 ADSLP30566 484 aaPredicted RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 PPARGP37231 505 aaPredicted RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 CSKP41240 450 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 PTDSS1P48651 473 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 PEX6Q13608 980 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 CUL3Q13618 768 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 ZNF678Q5SXM1 525 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 ASTLQ6HA08 431 aaPredicted RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 RPS27LQ71UM5 84 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 CUZD1Q86UP6 607 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 CPXM2Q8N436 756 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 TMEM105Q8N8V8 129 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 DCAF4L2Q8NA75 395 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 PHF21BQ96EK2 531 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 TMA16Q96EY4 203 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 MSANTD3Q96H12 275 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 FAR2Q96K12 515 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 ANKRD27Q96NW4 1050 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 EML4Q9HC35 981 aaKnown RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 VPS28Q9UK41 221 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 SIT1Q9Y3P8 196 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 H3BMM5 538 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 HOXC11O43248 304 aaPredicted RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 FZD6O60353 706 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 TYRP14679 529 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 ABL2P42684 1182 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 HERC3Q15034 1050 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 OR4D1Q15615 310 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 UNC50Q53HI1 259 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 TMEM198Q66K66 360 aa10.63□□□□□ -0.71
PKP4-206ENST00000452162 MYLK4Q86YV6 388 aaPredicted RBP10.63□□□□□ -0.71
PKP4-206ENST00000452162 SFTPA1Q8IWL2 248 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms