RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PYCR3Q53H96 274 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 ALS2CLQ60I27 953 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 SPOCD1Q6ZMY3 1216 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 PATE1Q8WXA2 126 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 LYSMD1Q96S90 227 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 SLC38A3Q99624 504 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 FRMD8P1Q9BZ68 369 aaPredicted RBP21.45■■□□□ 1.02
C9orf3-208ENST00000451893 GPR63Q9BZJ6 419 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 ZFYVE1Q9HBF4 777 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 RAD18Q9NS91 495 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 PLEKHM1Q9Y4G2 1056 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 PCDHGA7Q9Y5G6 932 aa21.45■■□□□ 1.02
C9orf3-208ENST00000451893 TRBV23OR9-2A0A075B6M9 112 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 RGSL1A5PLK6 1076 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 ERVH48-1M5A8F1 160 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 TK2O00142 265 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 PRLP01236 227 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 SLC2A4P14672 509 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 ITIH1P19827 911 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 GPR3P46089 330 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 B4GALNT1Q00973 533 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 C8orf74Q6P047 294 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 LYSMD3Q7Z3D4 306 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 NAGSQ8N159 534 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 AP1M1Q9BXS5 423 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 VPS18Q9P253 973 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.44■■□□□ 1.02
C9orf3-208ENST00000451893 SHOC2Q9UQ13 582 aa21.44■■□□□ 1.02
C9orf3-208ENST00000451893 V9GYY5 206 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-208ENST00000451893 SNX2O60749 519 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 PHF2O75151 1096 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 CDKN2BP42772 138 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 FNTAP49354 379 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 ZFP36L1Q07352 338 aaKnown RBP21.43■■□□□ 1.02
C9orf3-208ENST00000451893 DHX34Q14147 1143 aaKnown RBP21.43■■□□□ 1.02
C9orf3-208ENST00000451893 CLPPQ16740 277 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-208ENST00000451893 WDR93Q6P2C0 686 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 TTC13Q8NBP0 860 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 LSM14AQ8ND56 463 aaKnown RBP21.43■■□□□ 1.02
C9orf3-208ENST00000451893 TFB1MQ8WVM0 346 aaKnown RBP21.43■■□□□ 1.02
C9orf3-208ENST00000451893 CCNL2Q96S94 520 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-208ENST00000451893 KRT12Q99456 494 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 SLC25A51Q9H1U9 297 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 SEMA6CQ9H3T2 930 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 RMI1Q9H9A7 625 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 ARGLU1Q9NWB6 273 aaPredicted RBP21.43■■□□□ 1.02
C9orf3-208ENST00000451893 PRKAB1Q9Y478 270 aa21.43■■□□□ 1.02
C9orf3-208ENST00000451893 C3orf70A6NLC5 250 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-208ENST00000451893 B4GAT1O43505 415 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 PRB1P04280 392 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 MMP2P08253 660 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 PIRTP0C851 137 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 ACP5P13686 325 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 NR2C2P49116 596 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 CDK18Q07002 472 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 CLN3Q13286 438 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 KLF1Q13351 362 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-208ENST00000451893 IHHQ14623 411 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 LLGL1Q15334 1064 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 CCNG2Q16589 344 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 AADACL2Q6P093 401 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 MFSD7Q6UXD7 560 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 B4GALNT4Q76KP1 1039 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 PHYKPLQ8IUZ5 450 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 CNTD1Q8N815 330 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 PRELID2Q8N945 189 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 OR10G6Q8NH81 332 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 P3H4Q92791 437 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 USP7Q93009 1102 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 IMP4Q96G21 291 aaKnown RBP21.42■■□□□ 1.02
C9orf3-208ENST00000451893 SCARF2Q96GP6 870 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-208ENST00000451893 COX14Q96I36 57 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 SRPK1Q96SB4 655 aaKnown RBP21.42■■□□□ 1.02
C9orf3-208ENST00000451893 DPYSL5Q9BPU6 564 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 NUDT22Q9BRQ3 303 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 OSGEPL1Q9H4B0 414 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 ANKZF1Q9H8Y5 726 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 PCYOX1Q9UHG3 505 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 RAB21Q9UL25 225 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 SCN8AQ9UQD0 1980 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 KCNK6Q9Y257 313 aa21.42■■□□□ 1.02
C9orf3-208ENST00000451893 hCG_1818297A0A087WSY0 165 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 FAM187AA6NFU0 413 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 NVLO15381 856 aaKnown RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 DUX1O43812 170 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 CST8O60676 142 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 PMPCBO75439 489 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 SLC25A14O95258 325 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 RHOXF2BP0C7M4 288 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 LIPCP11150 499 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 CSTF2P33240 577 aaKnown RBP eCLIP21.41■■□□□ 1.021e-7■□□□□ 8.8
C9orf3-208ENST00000451893 NAA30Q147X3 362 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 BRD3Q15059 726 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 SIX1Q15475 284 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 MANEAQ5SRI9 462 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 HENMT1Q5T8I9 393 aaKnown RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 NKAIN2Q5VXU1 208 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 ZNF438Q7Z4V0 828 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 C17orf82Q86X59 251 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 SLITRK4Q8IW52 837 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms