RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FAM208BQ5VWN6 2430 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 ZFYVE26Q68DK2 2539 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 CAPN8A6NHC0 703 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 B4DGG1 531 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 F5H423 210 aaPredicted RBP16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 AP3B1O00203 1094 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 EIF2S3P41091 472 aaKnown RBP16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 CCL7P80098 99 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 CDK16Q00536 496 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 GUCY2DQ02846 1103 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 C3orf38Q5JPI3 329 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 IZUMO3Q5VZ72 239 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 DUPD1Q68J44 220 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 FOXR1Q6PIV2 292 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 RBM44Q6ZP01 1051 aaKnown RBP16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 LINC00523Q86TU6 105 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 TRIM74Q86UV6 250 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 IFT20Q8IY31 132 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 Q8N9G6 341 aaPredicted RBP16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 GPR156Q8NFN8 814 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 FGF11Q92914 225 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 FSD1LQ9BXM9 530 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 FRMD8Q9BZ67 464 aaPredicted RBP16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 DPH5Q9H2P9 285 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 LRRC40Q9H9A6 602 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 EPB41L5Q9HCM4 733 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 EIF2B3Q9NR50 452 aaKnown RBP16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 WHRNQ9P202 907 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 SUFUQ9UMX1 484 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 SNX24Q9Y343 169 aa16.92■□□□□ 0.3
PRPF40A-204ENST00000450303 A0A087WV48 116 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 A0A1W2PNU3 283 aaPredicted RBP16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 PMS2P1A4D2B8 440 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 INPP4BO15327 924 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 NOBOXO60393 691 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 PMPCBO75439 489 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 MT-CYBP00156 380 aaPredicted RBP16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 SOD1P00441 154 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 APRTP07741 180 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 ZNF30P17039 623 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 TPSB2P20231 275 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 AK4P27144 223 aaPredicted RBP16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 STC1P52823 247 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 CAV1Q03135 178 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 DPTQ07507 201 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 SPIDRQ14159 915 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 GALNT3Q14435 633 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 TPSAB1Q15661 275 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 QPCTQ16769 361 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 OGFOD3Q6PK18 319 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 PPP1R21Q6ZMI0 780 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 PDZD3Q86UT5 571 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 HOOK3Q86VS8 718 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 NRROSQ86YC3 692 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 SPATA22Q8NHS9 363 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 RIOK2Q9BVS4 552 aaKnown RBP16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 FAM129AQ9BZQ8 928 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 POLR1BQ9H9Y6 1135 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 SPATS2LQ9NUQ6 558 aaKnown RBP16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 FAM53CQ9NYF3 392 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 UBP1Q9NZI7 540 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 ANAPC5Q9UJX4 755 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 SATB2Q9UPW6 733 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 PLEKHM1Q9Y4G2 1056 aa16.91■□□□□ 0.3
PRPF40A-204ENST00000450303 UNC13CQ8NB66 2214 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 C1orf232A0A0U1RR37 186 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 SEC31AO94979 1220 aaKnown RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 AP2A1O95782 977 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 EPOP01588 193 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 RPLP0P05388 317 aaKnown RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 TEAD1P28347 426 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 RPL21P46778 160 aaKnown RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 LSSP48449 732 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 WNT3AP56704 352 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 VSNL1P62760 191 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 CDK18Q07002 472 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 MORF4L2Q15014 288 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 PCSK7Q16549 785 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 TBC1D25Q3MII6 688 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 LRRC69Q6ZNQ3 347 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 MARK2Q7KZI7 788 aaKnown RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 KLHDC8BQ8IXV7 354 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 IPMKQ8NFU5 416 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 GPBAR1Q8TDU6 330 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 TADA1Q96BN2 335 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 OXNAD1Q96HP4 312 aaPredicted RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 NAF1Q96HR8 494 aaKnown RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 MLPHQ9BV36 600 aaPredicted RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 ADGRE3Q9BY15 652 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 DMGDHQ9UI17 866 aaKnown RBP16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 RNF215Q9Y6U7 377 aa16.9■□□□□ 0.3
PRPF40A-204ENST00000450303 ITPR1Q14643 2758 aa16.89■□□□□ 0.3
PRPF40A-204ENST00000450303 CELSR3Q9NYQ7 3312 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 A0A1W2PQM1 296 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 ANKRD66B4E2M5 251 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 AGRPO00253 132 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 NTN3O00634 580 aaPredicted RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 RRP8O43159 456 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 TCEA3O75764 348 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 PIRTP0C851 137 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms