RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 PRKAR1AP10644 381 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ACTN1P12814 892 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF30P17039 623 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NR4A1P22736 598 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 APEX1P27695 318 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RBL1P28749 1068 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HLA-FP30511 346 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CXCR5P32302 372 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CIITAP33076 1130 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ACSL1P33121 698 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PGM1P36871 562 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MTIF2P46199 727 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 POU3F4P49335 361 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ALDH7A1P49419 539 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 GDI2P50395 445 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SCNN1GP51170 649 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 LIMK1P53667 647 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HADHBP55084 474 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MLLT10P55197 1068 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NPEPPSP55786 919 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MYL6P60660 151 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TGFB2P61812 414 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 UBE2IP63279 158 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 IL9RQ01113 521 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FLI1Q01543 452 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FMO1Q01740 532 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ROR1Q01973 937 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CNTN2Q02246 1040 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 LGALS3BPQ08380 585 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CSTF3Q12996 717 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SEMA3BQ13214 749 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NOGQ13253 232 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NAB1Q13506 487 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCNC3Q14003 757 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FGL2Q14314 439 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 GCKRQ14397 625 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NOMO1Q15155 1222 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SGCAQ16586 387 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CYP1B1Q16678 543 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PFKFB4Q16877 469 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRC36Q1X8D7 754 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC9C1Q4G0N8 1177 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 AASDHQ4L235 1098 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TIGD5Q53EQ6 642 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCDC157Q569K6 752 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZMAT1Q5H9K5 638 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 KRBOX4Q5JUW0 171 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 EFHC1Q5JVL4 640 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 UBAP2Q5T6F2 1119 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 C6orf163Q5TEZ5 329 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ATF7IP2Q5U623 682 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RETSATQ6NUM9 610 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ALKBH5Q6P6C2 394 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SHQ1Q6PI26 577 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMEM65Q6PI78 240 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TEPPQ6URK8 271 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CYP20A1Q6UW02 462 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MFSD6Q6ZSS7 791 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CENPUQ71F23 418 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF767PQ75MW2 155 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 OTOAQ7RTW8 1153 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMPRSS9Q7Z410 1059 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TFAP2DQ7Z6R9 452 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 AMIGO2Q86SJ2 522 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SETD3Q86TU7 594 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 GPAT4Q86UL3 456 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MIB1Q86YT6 1006 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARMC8Q8IUR7 673 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM126BQ8IXS8 530 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SRRM1Q8IYB3 904 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 KIAA2013Q8IYS2 634 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM9CQ8IZT9 166 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PQLC1Q8N2U9 271 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PARP8Q8N3A8 854 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CLIP4Q8N3C7 705 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RNF152Q8N8N0 203 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 GPR156Q8NFN8 814 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR8H1Q8NGG4 311 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR52N1Q8NH53 320 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAB3IL1Q8TBN0 382 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 BLOC1S5Q8TDH9 187 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 UTP15Q8TED0 518 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 S100ZQ8WXG8 99 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 BRI3BPQ8WY22 251 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 UFD1Q92890 307 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ART4Q93070 314 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ATP2A3Q93084 1043 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MCUR1Q96AQ8 359 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 C18orf25Q96B23 403 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMIGD2Q96BF3 282 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TSPAN17Q96FV3 270 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SH3YL1Q96HL8 342 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HIST1H2AHQ96KK5 128 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HS6ST2Q96MM7 605 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TSNARE1Q96NA8 513 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 UHRF1Q96T88 793 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HIST1H2AJQ99878 128 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 C7orf25Q9BPX7 421 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FDXACB1Q9BRP7 624 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZPBPQ9BS86 351 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms