RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 NAPRTQ6XQN6 538 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 OR2T34Q8NGX1 318 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 MAGEE2Q8TD90 523 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 BTN2A3PQ96KV6 586 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 DMRTB1Q96MA1 342 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 MIR1-1HGQ9H1L0 117 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 DTLQ9NZJ0 730 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 PIN4Q9Y237 131 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 PCP4L1A6NKN8 68 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 NDST3O95803 873 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 C2P06681 752 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 MYL3P08590 195 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 FASP25445 335 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 LRPAP1P30533 357 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 GRIK1P39086 918 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 PSMD8P48556 350 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 PPM1JQ5JR12 505 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 FBXO47Q5MNV8 452 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 FAM122CQ6P4D5 195 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 MPP5Q8N3R9 675 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 CHAC2Q8WUX2 184 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 KATNAL1Q9BW62 490 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 GATA5Q9BWX5 397 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 RHOJQ9H4E5 214 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 NDFIP2Q9NV92 336 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 SYBUQ9NX95 663 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC39A10Q9ULF5 831 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 A0A087X1B8 175 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 RASAL1O95294 804 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 PRKCGP05129 697 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ERVK-10P10266 1014 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 CYBAP13498 195 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 EIF2DP41214 584 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 GJA9P57773 515 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 LSM3P62310 102 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 CDH17Q12864 832 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 STEAP3Q658P3 488 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 CCBE1Q6UXH8 406 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 PAGE2Q7Z2X7 111 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ANKRD52Q8NB46 1076 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 RNF139Q8WU17 664 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 GLMNQ92990 594 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 WNT8BQ93098 351 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 P2RY11Q96G91 374 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ACAT2Q9BWD1 397 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 CASP8AP2Q9UKL3 1982 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 TRIM24O15164 1050 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 DUSP11O75319 330 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 SNAP29O95721 258 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 AP2A1O95782 977 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 DBTP11182 482 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 IGFBP6P24592 240 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 CRHR2Q13324 411 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ATP6AP1Q15904 470 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 TRAF7Q6Q0C0 670 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 DDIASQ8IXT1 998 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 CCNYL1Q8N7R7 359 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 NDNFQ8TB73 568 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 TRIM62Q9BVG3 475 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 SPAG4Q9NPE6 437 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZNF358Q9NW07 568 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 GTSE1Q9NYZ3 720 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 AAR2Q9Y312 384 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 MYCP01106 439 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 C7P10643 843 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 TFEBP19484 476 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 MPSTP25325 297 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 PSMB4P28070 264 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 GMPRP36959 345 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 GRIA4P48058 902 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 SDE2Q6IQ49 451 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ZNF544Q6NX49 715 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 GK5Q6ZS86 529 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 BNIPLQ7Z465 357 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC22A9Q8IVM8 553 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 FBXL6Q8N531 539 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 SGCDQ92629 289 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ITM2CQ9NQX7 267 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 CCM2LQ9NUG4 571 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 KLK14Q9P0G3 267 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 ATPIF1Q9UII2 106 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 DNMT3LQ9UJW3 386 aa13.37□□□□□ -0.27
SYNGAP1-204ENST00000449372 H0Y858 1186 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 MAP3K6O95382 1288 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 ALDH4A1P30038 563 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 MATKP42679 507 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 TPI1P60174 286 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 PPHLN1Q8NEY8 458 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 CENPNQ96H22 339 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 MUS81Q96NY9 551 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 TTYH2Q9BSA4 534 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 AGPAT4Q9NRZ5 378 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 FAM49BQ9NUQ9 324 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 NDUFS2O75306 463 aa13.36□□□□□ -0.27
SYNGAP1-204ENST00000449372 PTTG1O95997 202 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms