RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SLC25A14O95258 325 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-203ENST00000449049 ITGA2BP08514 1039 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 ZNF7P17097 686 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-203ENST00000449049 NSG1P42857 185 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 ABCG1P45844 678 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 KHDC1Q4VXA5 237 aaKnown RBP13.91□□□□□ -0.18
SHMT2-203ENST00000449049 GCNT7Q6ZNI0 430 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 TAOK1Q7L7X3 1001 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 C11orf74Q86VG3 221 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 SLC41A1Q8IVJ1 513 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 MZB1Q8WU39 189 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 GAB3Q8WWW8 586 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 BIRC8Q96P09 236 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 GPR22Q99680 433 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 MYOCQ99972 504 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 DUSP15Q9H1R2 295 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-203ENST00000449049 ACBD3Q9H3P7 528 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 WDR26Q9H7D7 661 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 CRYL1Q9Y2S2 319 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 HS3ST3A1Q9Y663 406 aa13.91□□□□□ -0.18
SHMT2-203ENST00000449049 IQANK1A0A1B0GTG1 560 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 UBA6A0AVT1 1052 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 PRR33A8MZF0 331 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 MAP3K13O43283 966 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 KRT38O76015 456 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 HOXC4P09017 264 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 TMED2Q15363 201 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 LGSNQ5TDP6 509 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 ZNF549Q6P9A3 640 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 GDAP1Q8TB36 358 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 FOXJ1Q92949 421 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 FUBP1Q96AE4 644 aaKnown RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 ATXN7L3BQ96GX2 97 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 BMFQ96LC9 184 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 SH3GL2Q99962 352 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 PHPT1Q9NRX4 125 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 MTO1Q9Y2Z2 717 aaKnown RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 PCDHB1Q9Y5F3 818 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 COMMD10Q9Y6G5 202 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 OAS3Q9Y6K5 1087 aaKnown RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 POM121BA6NF01 834 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 CFAP99D6REC4 459 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 TOR1BO14657 336 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 MTX2O75431 263 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 KRT37O76014 449 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 ESR1P03372 595 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 MYCLP1P12525 358 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 MSH3P20585 1137 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 CD27P26842 260 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 AKT1P31749 480 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 CLDN2P57739 230 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 PFN3P60673 137 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 BMPR2Q13873 1038 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 CTSL3PQ5NE16 218 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 KYAT3Q6YP21 454 aaKnown RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 ABI3BPQ7Z7G0 1075 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 TRIM74Q86UV6 250 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 CYP4X1Q8N118 509 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 DEFB119Q8N690 84 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 PGM2Q96G03 612 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 AARSD1Q9BTE6 412 aaKnown RBP13.9□□□□□ -0.18
SHMT2-203ENST00000449049 APOOQ9BUR5 198 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 LGR4Q9BXB1 951 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 CLPBQ9H078 707 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 OR1A2Q9Y585 309 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 PRSS21Q9Y6M0 314 aa13.9□□□□□ -0.18
SHMT2-203ENST00000449049 DOCK9Q9BZ29 2069 aa13.9□□□□□ -0.19
SHMT2-203ENST00000449049 FAM95CA0A1B0GW59 222 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 SNRPAP09012 282 aaKnown RBP13.89□□□□□ -0.19
SHMT2-203ENST00000449049 MYZAPP0CAP1 466 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 RALBP11234 206 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 ATP1B2P14415 290 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-203ENST00000449049 PKMP14618 531 aaKnown RBP13.89□□□□□ -0.19
SHMT2-203ENST00000449049 FMO4P31512 558 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 POLD2P49005 469 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 NUBP1P53384 320 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 KIAA1024LP59773 190 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 TMEM115Q12893 351 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-203ENST00000449049 ANGPT1Q15389 498 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 TNFAIP8L3Q5GJ75 292 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 RBM20Q5T481 1227 aaKnown RBP13.89□□□□□ -0.19
SHMT2-203ENST00000449049 ZNF648Q5T619 568 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-203ENST00000449049 MROH9Q5TGP6 573 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 MACC1Q6ZN28 852 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 ADGRG6Q86SQ4 1221 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 DCLK2Q8N568 766 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 ACVR1CQ8NER5 493 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 SNX19Q92543 992 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 ISL2Q96A47 359 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 ZBTB9Q96C00 473 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 DCUN1D1Q96GG9 259 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 SERAC1Q96JX3 654 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 HSPA12BQ96MM6 686 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms