RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NEDD4LQ96PU5 975 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 TMLHEQ9NVH6 421 aa10.68□□□□□ -0.7
LINC00342-202ENST00000448494 ZFR2Q9UPR6 939 aaKnown RBP10.68□□□□□ -0.7
LINC00342-202ENST00000448494 PLIN4Q96Q06 1357 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 TCRBV7S3A2A0A539 114 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 HMX2A2RU54 273 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RAB19A4D1S5 217 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 EEF2KO00418 725 aaKnown RBP10.67□□□□□ -0.7
LINC00342-202ENST00000448494 STX16O14662 325 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 NUPL2O15504 423 aaKnown RBP10.67□□□□□ -0.7
LINC00342-202ENST00000448494 SLC37A4O43826 429 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 HS6ST1O60243 411 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 TGM6O95932 706 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 SLC2A4P14672 509 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 CPB1P15086 417 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RFC2P35250 354 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RFX2P48378 723 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 STARP49675 285 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 NAPAP54920 295 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 EMX1Q04741 257 aaPredicted RBP10.67□□□□□ -0.7
LINC00342-202ENST00000448494 FPGSQ05932 587 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 GRIK2Q13002 908 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 PLD1Q13393 1074 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 DUSP6Q16828 381 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 AOC3Q16853 763 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 KIF19Q2TAC6 998 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 SPANXN2Q5MJ10 180 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RAP1GAP2Q684P5 730 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 ALG1LQ6GMV1 187 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 FAM45BPQ6NSW5 357 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 ZNF790Q6PG37 636 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 FAM45AQ8TCE6 357 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RAD51AP1Q96B01 352 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 FAM167AQ96KS9 214 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 HYLS1Q96M11 299 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 LRRC4Q9HBW1 653 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
LINC00342-202ENST00000448494 A0A1B0GWJ7 208 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 FAM92AA1XBS5 289 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 EFCAB9A8MZ26 197 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 SLCO1B7G3V0H7 640 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 PIK3R2O00459 728 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 KHNYNO15037 678 aaKnown RBP10.67□□□□□ -0.7
LINC00342-202ENST00000448494 TGFB1I1O43294 461 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 CLN5O75503 358 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RHOBTB1O94844 696 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 AHSGP02765 367 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 CYP11A1P05108 521 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 HPGDP15428 266 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 IL7RP16871 459 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RAB13P51153 203 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 KLHL12Q53G59 568 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 HSD17B12Q53GQ0 312 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 SEL1L3Q68CR1 1132 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 TXNDC11Q6PKC3 985 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 ZYG11AQ6WRX3 759 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 RRM2BQ7LG56 351 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 AURKBQ96GD4 344 aaPredicted RBP10.67□□□□□ -0.7
LINC00342-202ENST00000448494 FTHL17Q9BXU8 183 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 MKNK2Q9HBH9 465 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 VTI1BQ9UEU0 232 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 CDYLQ9Y232 598 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 ANKRD6Q9Y2G4 727 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 ADAMTS7Q9UKP4 1686 aa10.67□□□□□ -0.7
LINC00342-202ENST00000448494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 CCDC78A2IDD5 438 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 MROH6A6NGR9 719 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 EIF3DO15371 548 aaKnown RBP eCLIP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 PGRP06401 933 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 CCNYL3P0C7X3 344 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 EPS8Q12929 822 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ADAM15Q13444 863 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 HKDC1Q2TB90 917 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 C2CD6Q53TS8 623 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ARMC4Q5T2S8 1044 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ZNF425Q6IV72 752 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 LCN8Q6JVE9 175 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 RHOUQ7L0Q8 258 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 SLC47A2Q86VL8 602 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 RASAL3Q86YV0 1011 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 MCOLN2Q8IZK6 566 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ZNF557Q8N988 423 aaPredicted RBP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 FAM110BQ8TC76 370 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 KAT5Q92993 513 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ZNF566Q969W8 418 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 SDHCQ99643 169 aaPredicted RBP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 NPAS1Q99742 590 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ZNF577Q9BSK1 485 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ILKAPQ9H0C8 392 aaPredicted RBP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 WDR55Q9H6Y2 383 aaPredicted RBP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 IL17RBQ9NRM6 502 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 CACNA2D2Q9NY47 1150 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 TSR3Q9UJK0 312 aaKnown RBP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 INTS6Q9UL03 887 aaKnown RBP10.66□□□□□ -0.7
LINC00342-202ENST00000448494 NDUFAF1Q9Y375 327 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 PCDHB3Q9Y5E6 796 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 LYVE1Q9Y5Y7 322 aa10.66□□□□□ -0.7
LINC00342-202ENST00000448494 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms