RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ACSS2Q9NR19 701 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MAT2BQ9NZL9 334 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 DNAJB4Q9UDY4 337 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF780BQ9Y6R6 833 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 PMF1-BGLAPU3KQ54 211 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 IQCMA0A1B0GVH7 501 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CARNS1A5YM72 827 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SCAMP3O14828 347 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ADAMDEC1O15204 470 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MPZL2O60487 215 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 GCATO75600 419 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SLC25A12O75746 678 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 NDST3O95803 873 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SLC35G4P0C7Q5 338 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CREB1P16220 341 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ARF4P18085 180 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 AZGP1P25311 298 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 RGS1Q08116 209 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SMCO1Q147U7 214 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 PTGES3Q15185 160 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 LCN1P1Q5VSP4 162 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CAPN13Q6MZZ7 669 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 RASSF6Q6ZTQ3 369 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 OTOP3Q7RTS5 596 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ADGRG2Q8IZP9 1017 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 RAD51AP1Q96B01 352 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 AGAP2Q99490 1192 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 GBA3Q9H227 469 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ZFYVE1Q9HBF4 777 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SEMA3GQ9NS98 782 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 GULP1Q9UBP9 304 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SNX7Q9UNH6 387 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 FAM25EA8MYX2 175 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 C1QTNF3-AMACRE9PGA6 284 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 NDUFS2O75306 463 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SLC25A14O95258 325 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 C4BPAP04003 597 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 IFNW1P05000 195 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 UROSP10746 265 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 COL6A1P12109 1028 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SSR2P43308 183 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ADAM17P78536 824 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MRPS6P82932 125 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CYP4F8P98187 520 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MBTD1Q05BQ5 628 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 COL9A3Q14050 684 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 GRIK5Q16478 980 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CNPY1Q3B7I2 92 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 FSTL4Q6MZW2 842 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 RFWD3Q6PCD5 774 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 RHBDF2Q6PJF5 856 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ANKS1BQ7Z6G8 1248 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 FAM98AQ8NCA5 519 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 GRPEL2Q8TAA5 225 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 VANGL1Q8TAA9 524 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TOP1MTQ969P6 601 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 KCTD15Q96SI1 283 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 COQ10BQ9H8M1 238 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 IPPKQ9H8X2 491 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SGK2Q9HBY8 427 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TRPV5Q9NQA5 729 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SUCOQ9UBS9 1254 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 NR2E1Q9Y466 385 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 FAM172BPA6NC97 362 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 FPGTO14772 594 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SLC22A2O15244 555 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SMIM10L2AP0DMW4 78 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 SMIM10L2BP0DMW5 78 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 OGNP20774 298 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TIE1P35590 1138 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 PEX6Q13608 980 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TCEAL5Q5H9L2 206 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 IRAK1BP1Q5VVH5 260 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 ARMCX6Q7L4S7 300 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 LAPTM4BQ86VI4 370 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 STX12Q86Y82 276 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CYP4X1Q8N118 509 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 DAW1Q8N136 415 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 OR8H1Q8NGG4 311 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CSGALNACT1Q8TDX6 532 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 STYXQ8WUJ0 223 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 PIK3R3Q92569 461 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 TMCO6Q96DC7 493 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 CDCA5Q96FF9 252 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MYO19Q96H55 970 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 AHCYL2Q96HN2 611 aaKnown RBP7.73□□□□□ -1.17
NEDD9-204ENST00000448183 GPR21Q99679 349 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MCMBPQ9BTE3 642 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 NUDT4Q9NZJ9 180 aa7.73□□□□□ -1.17
NEDD9-204ENST00000448183 MAP2P11137 1827 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ISM1B1AKI9 464 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TP73O15350 636 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 NPHS1O60500 1241 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 PQBP1O60828 265 aaKnown RBP7.72□□□□□ -1.17
NEDD9-204ENST00000448183 TCEA3O75764 348 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ASLP04424 464 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 CTSEP14091 401 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 ITPKAP23677 461 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 FOXN2P32314 431 aa7.72□□□□□ -1.17
NEDD9-204ENST00000448183 PTPN9P43378 593 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms