RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KIAA1024LP59773 190 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 YPEL5P62699 121 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 NFATC4Q14934 902 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 TYSND1Q2T9J0 566 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 AARS2Q5JTZ9 985 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 LDLRAP1Q5SW96 308 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 KCTD16Q68DU8 428 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 DET1Q7L5Y6 550 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 ADGRG6Q86SQ4 1221 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 CNTN4Q8IWV2 1026 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 CTAGE3PQ8IX95 158 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 SLC22A18ASQ8N1D0 253 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 PPM1NQ8N819 430 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 MFSD2AQ8NA29 543 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 C2CD4AQ8NCU7 369 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 ATOH1Q92858 354 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 COPS8Q99627 209 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 OR2AG1Q9H205 316 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 ACSS3Q9H6R3 686 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 CAAP1Q9H8G2 361 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 ATXN10Q9UBB4 475 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 RAB23Q9ULC3 237 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 SMG5Q9UPR3 1016 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 GPR179Q6PRD1 2367 aa17.8■□□□□ 0.44
TRAPPC4-203ENST00000447216 A0A1B0GTW7 788 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 A0A1B0GVT2 93 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 UBA6A0AVT1 1052 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 S1PR4O95977 384 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 HOXC4P09017 264 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 MSH3P20585 1137 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 GABRB3P28472 473 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 TTPAP49638 278 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 THOP1P52888 689 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 LYPLAL1Q5VWZ2 237 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 ENPP7Q6UWV6 458 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 CERS6Q6ZMG9 384 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 CYS1Q717R9 158 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 MARK2Q7KZI7 788 aaKnown RBP17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 SYT12Q8IV01 421 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 LMNTD2Q8IXW0 634 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 DCUN1D1Q96GG9 259 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 WDR92Q96MX6 357 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 FUT8Q9BYC5 575 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 TRIM39Q9HCM9 518 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 MRPL40Q9NQ50 206 aaKnown RBP17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 GPR27Q9NS67 375 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 MOSPD1Q9UJG1 213 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 PRSS21Q9Y6M0 314 aa17.79■□□□□ 0.44
TRAPPC4-203ENST00000447216 IGLV3-16A0A075B6K0 115 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 TLR4O00206 839 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 SCAMP1O15126 338 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 FAM155BO75949 473 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 HAUS5O94927 633 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 EPN2O95208 641 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 SHBGP04278 402 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 GNSP15586 552 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 ZNF8P17098 575 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 AFF3P51826 1226 aaKnown RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 TMEM115Q12893 351 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 ITIH4Q14624 930 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 CCDC6Q16204 474 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 BEND6Q5SZJ8 279 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 ZNF449Q6P9G9 518 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 CNSTQ6PJW8 725 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 IQCHQ86VS3 1027 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 SPATS2Q86XZ4 545 aaKnown RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 MREGQ8N565 214 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 CLDN19Q8N6F1 224 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 RASGEF1AQ8N9B8 481 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 GABPB2Q8TAK5 448 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 OR1E3Q8WZA6 343 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 LPGAT1Q92604 370 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 CDKL2Q92772 493 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 TCF12Q99081 682 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 CYTH2Q99418 400 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 TTC1Q99614 292 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 FGF22Q9HCT0 170 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 FSCN3Q9NQT6 498 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 PNMA8BQ9ULN7 279 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 CRYL1Q9Y2S2 319 aa17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 PCYT1BQ9Y5K3 369 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-203ENST00000447216 ARHGEF17Q96PE2 2063 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 PATE3B3GLJ2 98 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 POC1B-GALNT4F8VUJ3 575 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 TOR1BO14657 336 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 VILLO15195 856 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 CDK14O94921 469 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 AHSGP02765 367 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 FUCA1P04066 466 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 CEACAM5P06731 702 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 H2AFXP16104 143 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 HTR1BP28222 390 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 FMO4P31512 558 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 PPARGP37231 505 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 CTSCP53634 463 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 EIF3BP55884 814 aaKnown RBP17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 FZD2Q14332 565 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 ZNF542PQ5EBM4 170 aa17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 PEAR1Q5VY43 1037 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC4-203ENST00000447216 MACC1Q6ZN28 852 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms