RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 STK16O75716 305 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 LRIG2O94898 1065 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 CSTF2P33240 577 aaKnown RBP eCLIP11.64□□□□□ -0.55
FN1-212ENST00000446046 KLHL17Q6TDP4 642 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ATG14Q6ZNE5 492 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 HIST1H2AAQ96QV6 131 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ZSCAN5AQ9BUG6 496 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 TAPBPLQ9BX59 468 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 C1QTNF1Q9BXJ1 281 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ZNF717Q9BY31 904 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 SEC16AO15027 2179 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 FAM234BA2RU67 622 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ADH1BP00325 375 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 CASP5P51878 434 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ZNF155Q12901 538 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 TCEAL6Q6IPX3 200 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 OR4K2Q8NGD2 314 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 ZBED6CLQ96FA7 236 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 C5orf34Q96MH7 638 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ARHGAP9Q9BRR9 750 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 BCO2Q9BYV7 579 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 IL1RAPQ9NPH3 570 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SERINC1Q9NRX5 453 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 TAF1P21675 1872 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 MTRF1O75570 445 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 NOL4O94818 638 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 PRAMEF1O95521 474 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 MT-CO1P00395 513 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SAGP10523 405 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 CAPGP40121 348 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 HNF4AP41235 474 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 BRCC3P46736 316 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 OMPP47874 163 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SLC13A2Q13183 592 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 OASLQ15646 514 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 KLHL12Q53G59 568 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 TTC27Q6P3X3 843 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ART5Q96L15 291 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 NSMCE3Q96MG7 304 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 L2HGDHQ9H9P8 463 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 PLEKHA1Q9HB21 404 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 INTS10Q9NVR2 710 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 FNIP2Q9P278 1114 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ZNF490Q9ULM2 529 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 STX16-NPEPL1H3BU86 382 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 FCHO1O14526 889 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 STX16O14662 325 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 CILPO75339 1184 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SMPD1P17405 629 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 PLEKHA7Q6IQ23 1121 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 TMPRSS11AQ6ZMR5 421 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SETD7Q8WTS6 366 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 DNAJC19Q96DA6 116 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 MTMR8Q96EF0 704 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 NDNQ99608 321 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 SH3GL2Q99962 352 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 ST6GALNAC4Q9H4F1 302 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 MRPS30Q9NP92 439 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 THUMPD1Q9NXG2 353 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 COG5Q9UP83 839 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 GNAZP19086 355 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 PLA2G4EQ3MJ16 856 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 AMER2Q8N7J2 671 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 RAD51AP1Q96B01 352 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 GPER1Q99527 375 aa11.64□□□□□ -0.55
FN1-212ENST00000446046 UNKQ9C0B0 810 aaKnown RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 ZFP37Q9Y6Q3 630 aaPredicted RBP11.64□□□□□ -0.55
FN1-212ENST00000446046 SLC31A1O15431 190 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 PLGP00747 810 aaPredicted RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 DUSP3P51452 185 aaPredicted RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 RAB25P57735 213 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 ZC3H14Q6PJT7 736 aaKnown RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 SLC29A4Q7RTT9 530 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 CPNE2Q96FN4 548 aaPredicted RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 LACRTQ9GZZ8 138 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 LRTM1Q9HBL6 345 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 GMEB2Q9UKD1 530 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 KCNA5P22460 613 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 CLCN7P51798 805 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 DMPKQ09013 629 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 TAF1AQ15573 450 aaPredicted RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 GRIK5Q16478 980 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 DAW1Q8N136 415 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 OR52K2Q8NGK3 314 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 CCM2Q9BSQ5 444 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 C6orf62Q9GZU0 229 aaPredicted RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 SLC40A1Q9NP59 571 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 DDX18Q9NVP1 670 aaKnown RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 WASHC1A8K0Z3 465 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 WASH3PC4AMC7 463 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 AP2A1O95782 977 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 TOP3BO95985 862 aaKnown RBP11.63□□□□□ -0.55
FN1-212ENST00000446046 GDI1P31150 447 aa11.63□□□□□ -0.55
FN1-212ENST00000446046 SMU1Q2TAY7 513 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms