RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 H7C0C1 242 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 CHUKO15111 745 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 DDX3YO15523 660 aaKnown RBP10.74□□□□□ -0.69
SF3A1-203ENST00000444440 EFSO43281 561 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 PRAMEF10O60809 474 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 SLC25A14O95258 325 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-203ENST00000444440 CPNE6O95741 557 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 AGTP01019 485 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 PYGMP11217 842 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 FASLGP48023 281 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 ATP5OP48047 213 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 GSDMDP57764 484 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 SLC1A5Q15758 541 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 ARHGAP40Q5TG30 622 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 IYDQ6PHW0 289 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 BZW1Q7L1Q6 419 aaKnown RBP10.74□□□□□ -0.69
SF3A1-203ENST00000444440 C11orf96Q7Z7L8 435 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 PIM3Q86V86 326 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 IPMKQ8NFU5 416 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 NAT14Q8WUY8 206 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC97Q96F63 343 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-203ENST00000444440 ZSCAN5AQ9BUG6 496 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 STRADBQ9C0K7 418 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 GBA3Q9H227 469 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 TRIM39Q9HCM9 518 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 PRDM8Q9NQV8 689 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 IL17CQ9P0M4 197 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 RSPH14Q9UHP6 348 aa10.74□□□□□ -0.69
SF3A1-203ENST00000444440 TCRBV7S2A1N4TA0A589 114 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 MACROD2A1Z1Q3 448 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A9O60656 530 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 SNX2O60749 519 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 C1QL1O75973 258 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 FTCDO95954 541 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 THRAP10827 490 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 FGF3P11487 239 aaPredicted RBP10.73□□□□□ -0.69
SF3A1-203ENST00000444440 BRAFP15056 766 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A6P19224 532 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 WT1P19544 449 aaPredicted RBP10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A1P22309 533 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A4P22310 534 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 PSMB4P28070 264 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 PTPN7P35236 360 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 ADRA1AP35348 466 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A3P35503 534 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 HMGCLP35914 325 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 GPR3P46089 330 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 LIMK2P53671 638 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 MAPK10P53779 464 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 COPS2P61201 443 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 EIF3IQ13347 325 aaKnown RBP10.73□□□□□ -0.69
SF3A1-203ENST00000444440 MSLNQ13421 630 aaPredicted RBP10.73□□□□□ -0.69
SF3A1-203ENST00000444440 XRCC4Q13426 336 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 NFATC2Q13469 925 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 COL9A2Q14055 689 aaPredicted RBP10.73□□□□□ -0.69
SF3A1-203ENST00000444440 LRP8Q14114 963 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 CHRNA6Q15825 494 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 BLOC1S5Q8TDH9 187 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 USP7Q93009 1102 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 VAT1Q99536 393 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 APOL2Q9BQE5 337 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 FICDQ9BVA6 458 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 TBC1D10AQ9BXI6 508 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 DPH1Q9BZG8 443 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 RMI1Q9H9A7 625 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A7Q9HAW7 530 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A10Q9HAW8 530 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A8Q9HAW9 530 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 IL26Q9NPH9 171 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 KLC4Q9NSK0 619 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 KCTD3Q9Y597 815 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 PCDHGA7Q9Y5G6 932 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 ARL5AQ9Y689 179 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 CAPN6Q9Y6Q1 641 aa10.73□□□□□ -0.69
SF3A1-203ENST00000444440 BAHCC1Q9P281 2608 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC66A2RUB6 948 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 MTSS1O43312 755 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 JMJD7P0C870 316 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 RBP3P10745 1247 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 F3P13726 295 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 CETN2P41208 172 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
SF3A1-203ENST00000444440 CLCNKAP51800 687 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 CTSCP53634 463 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 RWDD2BP57060 319 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 EIF3EP60228 445 aaKnown RBP10.72□□□□□ -0.69
SF3A1-203ENST00000444440 UBE2IP63279 158 aaKnown RBP10.72□□□□□ -0.69
SF3A1-203ENST00000444440 HHEXQ03014 270 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 KIF5AQ12840 1032 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 MPP3Q13368 585 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 SQSTM1Q13501 440 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 ANKRD20A2Q5SQ80 823 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 ANKRD20A1Q5TYW2 823 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 ANKRD20A3Q5VUR7 823 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 KIAA1614Q5VZ46 1190 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 PDPK2PQ6A1A2 396 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 XKR5Q6UX68 686 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 FAM151BQ6UXP7 276 aa10.72□□□□□ -0.69
SF3A1-203ENST00000444440 GPR155Q7Z3F1 870 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms